RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ANAPC4Q9UJX5 808 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 DLG5Q8TDM6 1919 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 CAP2P40123 477 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 ECE1P42892 770 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 DNM2P50570 870 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 ARHGEF6Q15052 776 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 C15orf52Q6ZUT6 534 aaKnown RBP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 LINC00301Q8NCQ3 95 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 LPAR1Q92633 364 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 BAZ2BQ9UIF8 2168 aaKnown RBP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 HSF2BPO75031 334 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 NDUFA8P51970 172 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 PNOCQ13519 176 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 CEP112Q8N8E3 955 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 TMEM87AQ8NBN3 555 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 FBXO28Q9NVF7 368 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 FBXO40Q9UH90 709 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 PCDHA6Q9UN73 950 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 PCDHA8Q9Y5H6 950 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 VIL1P09327 827 aaKnown RBP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 RESTQ13127 1097 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 ZFPM1Q8IX07 1006 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 MRPL44Q9H9J2 332 aaKnown RBP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 TMEM260Q9NX78 707 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 TMEM63CQ9P1W3 806 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 BCCIPQ9P287 314 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC113-201ENST00000219299 C19orf81C9J6K1 198 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 IGBP1P78318 339 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 MYL5Q02045 173 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 MCM6Q14566 821 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 GLIS2Q9BZE0 524 aaPredicted RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 ZSWIM4Q9H7M6 989 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 BARHL2Q9NY43 387 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 GCNT3O95395 438 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 LONP1P36776 959 aaKnown RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 DCAF17Q5H9S7 520 aaPredicted RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 MICALL1Q8N3F8 863 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 KDM3AQ9Y4C1 1321 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 RGPD5Q99666 1765 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 TUBBP07437 444 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 TAF1CQ15572 869 aaPredicted RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 FAM83AQ86UY5 434 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 CDHR1Q96JP9 859 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 RCOR1Q9UKL0 485 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 EBAG9O00559 213 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 TROAPQ12815 778 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 MYRIPQ8NFW9 859 aa10.43□□□□□ -0.74
CCDC113-201ENST00000219299 PHRF1Q9P1Y6 1649 aaKnown RBP10.43□□□□□ -0.74
CCDC113-201ENST00000219299 OPA1O60313 960 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CSGALNACT2Q8N6G5 542 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CTAGE1Q96RT6 745 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 WDR11Q9BZH6 1224 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 STK36Q9NRP7 1315 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 RGPD2P0DJD1 1756 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 NEBLO76041 1014 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 STRN3Q13033 797 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SNAPC2Q13487 334 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 MAATS1Q7Z4T9 603 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SCYL3Q8IZE3 742 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 IMPG2Q9BZV3 1241 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SH3GLB2Q9NR46 395 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 GPRC5DQ9NZD1 345 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 RGS17Q9UGC6 210 aaPredicted RBP10.42□□□□□ -0.74
CCDC113-201ENST00000219299 AK9Q5TCS8 1911 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ADM5C9JUS6 153 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 MEIS1O00470 390 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ARHGAP4P98171 946 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 FAM102BQ5T8I3 360 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 NBPF11Q86T75 865 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ALS2Q96Q42 1657 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CCL15-CCL14A0A0B4J2E2 113 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CCND2P30279 289 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CCL15Q16663 113 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 SLC51AQ86UW1 340 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 TEX13BQ9BXU2 312 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 FZD1Q9UP38 647 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 LAD1O00515 517 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 CETN3O15182 167 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ARID5AQ03989 594 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 AP3B2Q13367 1082 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 MLKLQ8NB16 471 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
CCDC113-201ENST00000219299 ACAD9Q9H845 621 aa10.42□□□□□ -0.74
CCDC113-201ENST00000219299 IFNKQ9P0W0 207 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms