RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SPTLC3Q9NUV7 552 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 CTNND2Q9UQB3 1225 aa19.55■□□□□ 0.72
VRK1-201ENST00000216639 RHOBTB3O94955 611 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 SREBF1P36956 1147 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 LRMPQ12912 555 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 KMT5BQ4FZB7 885 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 NLGN2Q8NFZ4 835 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 LPAR1Q92633 364 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 MED15Q96RN5 788 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 DEFB129Q9H1M3 183 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 MRPL11Q9Y3B7 192 aaKnown RBP19.54■□□□□ 0.72
VRK1-201ENST00000216639 KDM3AQ9Y4C1 1321 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 POTEMA6NI47 508 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 TBX3O15119 743 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 PPP1R2P41236 205 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 STX17P56962 302 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 GRB10Q13322 594 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 APOBEC3FQ8IUX4 373 aaKnown RBP19.54■□□□□ 0.72
VRK1-201ENST00000216639 CTAGE1Q96RT6 745 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 TRIM9Q9C026 710 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
VRK1-201ENST00000216639 SAMSN1Q9NSI8 373 aaKnown RBP19.54■□□□□ 0.72
VRK1-201ENST00000216639 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.54■□□□□ 0.72
VRK1-201ENST00000216639 ZNF541Q9H0D2 1346 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 KLRC4O43908 158 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 PRELPP51888 382 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 ASIC1P78348 528 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 Q4G0T1 1027 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 VSTM4Q8IW00 320 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 NELFBQ8WX92 580 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 CRYGNQ8WXF5 182 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 LARP4BQ92615 738 aaKnown RBP19.53■□□□□ 0.72
VRK1-201ENST00000216639 NT5C3AQ9H0P0 336 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 KCNMB3Q9NPA1 279 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 EXOC1Q9NV70 894 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 SCAF8Q9UPN6 1271 aaKnown RBP19.53■□□□□ 0.72
VRK1-201ENST00000216639 STK24Q9Y6E0 443 aa19.53■□□□□ 0.72
VRK1-201ENST00000216639 ABCB11O95342 1321 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 WDR46O15213 610 aaKnown RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.72
VRK1-201ENST00000216639 SPAG1Q07617 926 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 HSP90AA4PQ58FG1 418 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 DNTTIP2Q5QJE6 756 aaKnown RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 GIMAP8Q8ND71 665 aaPredicted RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 ANKRD20A12PQ8NF67 263 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 NAP1L5Q96NT1 182 aaPredicted RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 PNMA5Q96PV4 448 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 GLIS2Q9BZE0 524 aaPredicted RBP19.52■□□□□ 0.72
VRK1-201ENST00000216639 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.72
VRK1-201ENST00000216639 PSMA7O14818 248 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 OPLAHO14841 1288 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 SKILP12757 684 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 HOXA7P31268 230 aaPredicted RBP19.51■□□□□ 0.71
VRK1-201ENST00000216639 CIITAP33076 1130 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 PRCPP42785 496 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 FILIP1LQ4L180 1135 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 TMEM119Q4V9L6 283 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 CDKAL1Q5VV42 579 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 ADSSL1Q8N142 457 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 LRRC15Q8TF66 581 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 RAD54LQ92698 747 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 GDAQ9Y2T3 454 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 CYP3A4P08684 503 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 HOXA13P31271 388 aaPredicted RBP19.51■□□□□ 0.71
VRK1-201ENST00000216639 ZNF76P36508 570 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 PDE4DQ08499 809 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 PRR16Q569H4 304 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 CNNM4Q6P4Q7 775 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 FAM20AQ96MK3 541 aa19.51■□□□□ 0.71
VRK1-201ENST00000216639 CFBP00751 764 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 LMNB1P20700 586 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 CCT6AP40227 531 aaKnown RBP19.5■□□□□ 0.71
VRK1-201ENST00000216639 USP14P54578 494 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 HAUS3Q68CZ6 603 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 ARHGAP27Q6ZUM4 889 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 GPC2Q8N158 579 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 PRPF38AQ8NAV1 312 aaKnown RBP19.5■□□□□ 0.71
VRK1-201ENST00000216639 ERMNQ8TAM6 284 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 DHTKD1Q96HY7 919 aaPredicted RBP19.5■□□□□ 0.71
VRK1-201ENST00000216639 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 BLOC1S4Q9NUP1 217 aa19.5■□□□□ 0.71
VRK1-201ENST00000216639 ASTN2O75129 1339 aaPredicted RBP19.5■□□□□ 0.71
VRK1-201ENST00000216639 PVALEFA0A1B0GWK0 134 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 MCM6Q14566 821 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 ARID5BQ14865 1188 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 HYIQ5T013 277 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
VRK1-201ENST00000216639 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
VRK1-201ENST00000216639 FCHSD1Q86WN1 690 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 C17orf53Q8N3J3 647 aaPredicted RBP19.49■□□□□ 0.71
VRK1-201ENST00000216639 P2RX7Q99572 595 aaKnown RBP19.49■□□□□ 0.71
VRK1-201ENST00000216639 SLF1Q9BQI6 1058 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 AS3MTQ9HBK9 375 aa19.49■□□□□ 0.71
VRK1-201ENST00000216639 A0A1B0GTH6 734 aa19.48■□□□□ 0.71
VRK1-201ENST00000216639 NBPF12Q5TAG4 269 aaPredicted RBP19.48■□□□□ 0.71
VRK1-201ENST00000216639 ANGEL2Q5VTE6 544 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms