RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLFNL1Q499Z3 407 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
SIX4-201ENST00000216513 TRPA1O75762 1119 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 PPP1R21Q6ZMI0 780 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 GPRC5AQ8NFJ5 357 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 PPP2R3CQ969Q6 453 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 SH3BP5O60239 455 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 MYZAPP0CAP1 466 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 FERP16591 822 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 ANXA13P27216 316 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
SIX4-201ENST00000216513 HAUS2Q9NVX0 235 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 PCDHA4Q9UN74 947 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 CTSHP09668 335 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 XPAP23025 273 aaPredicted RBP15.15■□□□□ 0.02
SIX4-201ENST00000216513 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
SIX4-201ENST00000216513 ATN1P54259 1190 aaPredicted RBP15.15■□□□□ 0.02
SIX4-201ENST00000216513 GSDMDP57764 484 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 SELENOSQ9BQE4 189 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
SIX4-201ENST00000216513 F5H6K3 240 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
SIX4-201ENST00000216513 KLRC3Q07444 240 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 COG2Q14746 738 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 GLIS2Q9BZE0 524 aaPredicted RBP15.14■□□□□ 0.01
SIX4-201ENST00000216513 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 ASIC2Q16515 512 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 ZNF34Q8IZ26 560 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 CEP95Q96GE4 821 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 GPATCH11Q8N954 259 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 GDAP1L1Q96MZ0 367 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 COL4A3BPQ9Y5P4 624 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 TLDC2A0PJX2 215 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 COPB2P35606 906 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 BCRP11274 1271 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 PAK1Q13153 545 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 NOSTRINQ8IVI9 506 aa15.14■□□□□ 0.01
SIX4-201ENST00000216513 GIMAP8Q8ND71 665 aaPredicted RBP15.14■□□□□ 0.01
SIX4-201ENST00000216513 CCDC63Q8NA47 563 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 NMT2O60551 498 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 STK10O94804 968 aaKnown RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 TXNP10599 105 aaKnown RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 C1orf112Q9NSG2 853 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 ZSWIM5Q9P217 1185 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 MST1RQ04912 1400 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 LACTBP83111 547 aaPredicted RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 CDC42EP5Q6NZY7 148 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 AGBL3Q8NEM8 1001 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 MYO1AQ9UBC5 1043 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 E9PCH4 1651 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 INTS5Q6P9B9 1019 aaKnown RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 FMNL3Q8IVF7 1028 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 TRIM31Q9BZY9 425 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
SIX4-201ENST00000216513 PTPREP23469 700 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 GJA10Q969M2 543 aa15.13■□□□□ 0.01
SIX4-201ENST00000216513 LUC7L2Q9Y383 392 aaKnown RBP15.13■□□□□ 0.01
SIX4-201ENST00000216513 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 NTSR2O95665 410 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 CTTNQ14247 550 aaKnown RBP15.12■□□□□ 0.01
SIX4-201ENST00000216513 SLC9C1Q4G0N8 1177 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 BNIP3LO60238 219 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 ARHGAP4P98171 946 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 EHBP1Q8NDI1 1231 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 HSPA4P34932 840 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 MAP9Q49MG5 647 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 RGL2O15211 777 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 PNOCQ13519 176 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 SF3B3Q15393 1217 aaKnown RBP15.12■□□□□ 0.01
SIX4-201ENST00000216513 NOP9Q86U38 636 aaKnown RBP15.12■□□□□ 0.01
SIX4-201ENST00000216513 KIF5AQ12840 1032 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 RSPH14Q9UHP6 348 aa15.12■□□□□ 0.01
SIX4-201ENST00000216513 ZNF853P0CG23 659 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 NEDD9Q14511 834 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 UAP1Q16222 522 aaPredicted RBP15.11■□□□□ 0.01
SIX4-201ENST00000216513 ME3Q16798 604 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 UNC13BO14795 1591 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 TACC1O75410 805 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA8FQ08AF8 430 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA8DPQ0D2H9 430 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 MYOCDQ8IZQ8 938 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
SIX4-201ENST00000216513 INCENPQ9NQS7 918 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 RASAL2Q9UJF2 1139 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA6CA6NDK9 693 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA6BA6NDN3 693 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA6DP0CG33 693 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 AKR1B1P15121 316 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms