RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 TBCKQ8TEA7 893 aa11.35□□□□□ -0.59
RTCB-201ENST00000216038 ACAD9Q9H845 621 aa11.35□□□□□ -0.59
RTCB-201ENST00000216038 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
RTCB-201ENST00000216038 DDX49Q9Y6V7 483 aaKnown RBP11.35□□□□□ -0.59
RTCB-201ENST00000216038 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
RTCB-201ENST00000216038 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
RTCB-201ENST00000216038 NONOQ15233 471 aaKnown RBP eCLIP11.34□□□□□ -0.59
RTCB-201ENST00000216038 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 FAM177A1Q8N128 213 aaPredicted RBP11.34□□□□□ -0.59
RTCB-201ENST00000216038 ANKRD35Q8N283 1001 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
RTCB-201ENST00000216038 USP28Q96RU2 1077 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 A1CFQ9NQ94 594 aaKnown RBP11.34□□□□□ -0.59
RTCB-201ENST00000216038 ATP6V1DQ9Y5K8 247 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
RTCB-201ENST00000216038 SPDYE3A6NKU9 549 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 FIBPO43427 364 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 HSD17B4P51659 736 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 ZNF445P59923 1031 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 C1QTNF8P60827 252 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 KRT25Q7Z3Z0 450 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 MCF2L2Q86YR7 1114 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 CCAR1Q8IX12 1150 aaKnown RBP11.33□□□□□ -0.6
RTCB-201ENST00000216038 ANO3Q9BYT9 981 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 CYP39A1Q9NYL5 469 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 TLR2O60603 784 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 TRPA1O75762 1119 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 PGK2P07205 417 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 ZNF174Q15697 407 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 LETM2Q2VYF4 491 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
RTCB-201ENST00000216038 TAAR1Q96RJ0 339 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 GLT8D2Q9H1C3 349 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 PNMA2Q9UL42 364 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 ZKSCAN5Q9Y2L8 839 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 LCTP09848 1927 aa11.33□□□□□ -0.6
RTCB-201ENST00000216038 ADGRA2Q96PE1 1338 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 SLC25A27O95847 323 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 HSPA6P17066 643 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 MCM7P33993 719 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 FAM110CQ1W6H9 321 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 TKFCQ3LXA3 575 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
RTCB-201ENST00000216038 ZCCHC17Q9NP64 241 aaKnown RBP11.32□□□□□ -0.6
RTCB-201ENST00000216038 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
RTCB-201ENST00000216038 CA12O43570 354 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 EDIL3O43854 480 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 CCNT1O60563 726 aaKnown RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 BCRP11274 1271 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 KRT85P78386 507 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 CCNA1P78396 465 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 SF3A1Q15459 793 aaKnown RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 RILPL1Q5EBL4 403 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 MCM3APO60318 1980 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 DNAH12Q6ZR08 3092 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 TDP2O95551 362 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 MAP2K2P36507 400 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 NEK8Q86SG6 692 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
RTCB-201ENST00000216038 MMP19Q99542 508 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 MROH8Q9H579 483 aa11.31□□□□□ -0.6
RTCB-201ENST00000216038 FCER1AP12319 257 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 MARCKSP29966 332 aaPredicted RBP11.3□□□□□ -0.6
RTCB-201ENST00000216038 KCTD2Q14681 263 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 CYP2W1Q8TAV3 490 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 PRIMPOLQ96LW4 560 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 RNF186Q9NXI6 227 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 ASTN1O14525 1302 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
RTCB-201ENST00000216038 SREBF1P36956 1147 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 GHRHRQ02643 423 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 ARHGEF16Q5VV41 709 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 SHCBP1Q8NEM2 672 aa11.3□□□□□ -0.6
RTCB-201ENST00000216038 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms