RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SSBP05455 408 aaKnown RBP eCLIP14.67□□□□□ -0.06
CTNS-201ENST00000046640 PRPHP41219 470 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 SPAG1Q07617 926 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 LRRC41Q15345 812 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 TEKT1Q969V4 418 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 CCDC102AQ96A19 550 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 CALML4Q96GE6 196 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 SRCAPQ6ZRS2 3230 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 ZNF543Q08ER8 600 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 RAD51AP2Q09MP3 1159 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 GPS2Q13227 327 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 KCNK18Q7Z418 384 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 MB21D1Q8N884 522 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 GLIS3Q8NEA6 775 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 DUSP9Q99956 384 aaKnown RBP14.67□□□□□ -0.06
CTNS-201ENST00000046640 TMX4Q9H1E5 349 aaPredicted RBP14.67□□□□□ -0.06
CTNS-201ENST00000046640 UBR3Q6ZT12 1888 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 CRKP46108 304 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 GRB10Q13322 594 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 TTI2Q6NXR4 508 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 TUBGCP2Q9BSJ2 902 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 HDAC6Q9UBN7 1215 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 DDTLA6NHG4 134 aaPredicted RBP14.66□□□□□ -0.06
CTNS-201ENST00000046640 MYMKA6NI61 221 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 GDF11O95390 407 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
CTNS-201ENST00000046640 VSNL1P62760 191 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 ZSCAN26Q16670 478 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 NOA1Q8NC60 698 aaKnown RBP14.66□□□□□ -0.06
CTNS-201ENST00000046640 SNX29Q8TEQ0 813 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 CAPZA3Q96KX2 299 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 TBC1D7Q9P0N9 293 aa14.66□□□□□ -0.06
CTNS-201ENST00000046640 KLRG2A4D1S0 409 aaPredicted RBP14.65□□□□□ -0.06
CTNS-201ENST00000046640 SRGAP2O75044 1071 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
CTNS-201ENST00000046640 KCNB1Q14721 858 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 TXLNBQ8N3L3 684 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 KIAA0895Q8NCT3 520 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 ZMYND10O75800 440 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 HLA-DOAP06340 250 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 NPR1P16066 1061 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 CHRNA5P30532 468 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 ECM1Q16610 540 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 SV2BQ7L1I2 683 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 CEP112Q8N8E3 955 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 P2RX5Q93086 422 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 AK8Q96MA6 479 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 PNMA5Q96PV4 448 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 FAN1Q9Y2M0 1017 aa14.65□□□□□ -0.06
CTNS-201ENST00000046640 CCDC151A5D8V7 595 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 TRIM21P19474 475 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 TBC1D8BQ0IIM8 1120 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CNOT6LQ96LI5 555 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 MTMR9Q96QG7 549 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 NAA15Q9BXJ9 866 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 UBXN6Q9BZV1 441 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 PSTPIP2Q9H939 334 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 LCMT1Q9UIC8 334 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 LUC7L2Q9Y383 392 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 PNMA6FA0A0J9YX94 578 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CTAGE15A4D2H0 777 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 LGALS16A8MUM7 142 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 ATP8B1O43520 1251 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 EEF2P13639 858 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 IKQ13123 557 aaPredicted RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 BEND6Q5SZJ8 279 aaPredicted RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 CYP26C1Q6V0L0 522 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CTAGE6Q86UF2 777 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 TMTC1Q8IUR5 882 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 CCDC47Q96A33 483 aaKnown RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 NAPGQ99747 312 aaPredicted RBP14.64□□□□□ -0.07
CTNS-201ENST00000046640 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 ITIH6Q6UXX5 1313 aa14.64□□□□□ -0.07
CTNS-201ENST00000046640 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 TMEM266Q2M3C6 531 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 C10orf67Q8IYJ2 551 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 NOC4LQ9BVI4 516 aaKnown RBP14.63□□□□□ -0.07
CTNS-201ENST00000046640 SEMA6BQ9H3T3 888 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 DDX25Q9UHL0 483 aaKnown RBP14.63□□□□□ -0.07
CTNS-201ENST00000046640 TRIM66O15016 1216 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 ALDH1B1P30837 517 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 SLC1A4P43007 532 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 NOVP48745 357 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 NT5C2P49902 561 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 SEPT2Q15019 361 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 BRD3Q15059 726 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 USH1GQ495M9 461 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 LARP4BQ92615 738 aaKnown RBP14.63□□□□□ -0.07
CTNS-201ENST00000046640 ANKRD65E5RJM6 399 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 CCNE1P24864 410 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms