RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 UBN2Q6ZU65 1347 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 SERPINB2P05120 415 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 POTEJP0CG39 1038 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 CDC25AP30304 524 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 TBC1D5Q92609 795 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 EHMT1Q9H9B1 1298 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 CDC23Q9UJX2 597 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 C4BP0C0L5 1744 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 ZNF831Q5JPB2 1677 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 HERC4Q5GLZ8 1057 aaPredicted RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 MORC4Q8TE76 937 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 DNM2P50570 870 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 SESN3P58005 492 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 SCARF1Q14162 830 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 NFIXQ14938 502 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 C2CD5Q86YS7 1000 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 MB21D2Q8IYB1 491 aaPredicted RBP13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 DONSONQ9NYP3 566 aa13.36□□□□□ -0.27
TSPAN9-201ENST00000011898 NTSR2O95665 410 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 FOXO4P98177 505 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 KRT71Q3SY84 523 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 GOLGA8KD6RF30 607 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 PPP1R12AO14974 1030 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 DYNLL1P63167 89 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 NAIF1Q69YI7 327 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 IFT20Q8IY31 132 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 IFIH1Q9BYX4 1025 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 GOLGA8HP0CJ92 632 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 RBL2Q08999 1139 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 IQCB1Q15051 598 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 SLC9C1Q4G0N8 1177 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 CYB5R4Q7L1T6 521 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 NLRC4Q9NPP4 1024 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 TNNC1P63316 161 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 CALCRLQ16602 461 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 MUM1L1Q5H9M0 696 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 CAPRIN2Q6IMN6 1127 aaKnown RBP13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
TSPAN9-201ENST00000011898 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 COG7P83436 770 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 STMN4Q9H169 189 aaPredicted RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 TXNDC9O14530 226 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 DDAH1O94760 285 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 GYS1P13807 737 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 PTPREP23469 700 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 TECP42680 631 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 CASP7P55210 303 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 MYO1EQ12965 1108 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 PROM2Q8N271 834 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 SLC35F6Q8N357 371 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 RASGRP4Q8TDF6 673 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 CTIFO43310 598 aaKnown RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 KRT13P13646 458 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.34□□□□□ -0.272e-18■■■■■ 216.3
TSPAN9-201ENST00000011898 BIN2Q9UBW5 565 aaPredicted RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 G3BP2Q9UN86 482 aaKnown RBP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 ZNF609O15014 1411 aa13.34□□□□□ -0.27
TSPAN9-201ENST00000011898 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 FAM13AO94988 1023 aa13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 CDC27P30260 824 aa13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 ALDH3A1P30838 453 aa13.33□□□□□ -0.27
TSPAN9-201ENST00000011898 TAF11Q15544 211 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms