RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Smarca1Q6PGB8 1046 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Rps6ka6Q7TPS0 764 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 HlfQ8BW74 295 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Q8C5C9 218 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Lsm14bQ8CGC4 385 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Sde2Q8K1J5 448 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Syf2Q9D198 242 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tbx18Q9EPZ6 613 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Actn2Q9JI91 894 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Sertad1Q9JL10 236 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tuft1O08970 390 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gad1P48318 593 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kiaa1468Q148V7 1216 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kctd1Q5M956 257 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Fam183bQ5NC57 135 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Arhgap44Q5SSM3 814 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Shc3Q61120 474 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Pabpc4Q6PHQ9 660 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Actn1Q7TPR4 892 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Elmo3Q8BYZ7 720 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Apbb1ipQ8R5A3 670 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ctnnbl1Q9CWL8 563 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Parp2O88554 559 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Alppl2P24823 529 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Polr2fP61219 127 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 KhsrpQ3U0V1 748 aaKnown RBP10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Rnf207Q3V3A7 635 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Mapk6Q61532 720 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Msl1Q6PDM1 616 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Alx1Q8C8B0 326 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Lrp2bpQ9D4C6 346 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Znf654Q9DAU9 571 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tob2Q9JM55 345 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gkap1Q9JMB0 366 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Itga2bQ9QUM0 1033 aa10.3□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gm7168A0AUV4 508 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 P4hbP09103 509 aaKnown RBP10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Trim80Q3V061 624 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ccdc172Q810N9 267 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tubb4aQ9D6F9 444 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kiaa1210E9Q0C6 1637 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gm38392E9Q2A2 434 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Stat3P42227 770 aaKnown RBP10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Fdx1P46656 188 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Myo1fP70248 1099 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Large2Q5XPT3 690 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Krt42Q6IFX2 452 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Traf3ip3Q8C0G2 513 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Scyl2Q8CFE4 930 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Dhx58Q99J87 678 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ears2Q9CXJ1 523 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kdm3aQ6PCM1 1323 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Rreb1Q3UH06 1700 aaKnown RBP10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gm6588E9Q3K0 461 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Trove2O08848 538 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 GabrdP22933 449 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Siah1aP61092 282 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Q3TYL0 343 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ddb1Q3U1J4 1140 aaKnown RBP10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Pacsin1Q61644 441 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Adat2Q6P6J0 191 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ttll4Q80UG8 1193 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Rassf2Q8BMS9 326 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Zmynd10Q99ML0 440 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Fam133bQ9CVI2 245 aaKnown RBP10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Spata1Q9D5R4 444 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kcnq5Q9JK45 933 aa10.29□□□□□ -0.76
Usp28-203ENSMUST00000213874 Simc1E9Q6E9 1354 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Skor2A7M7C7 1008 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Zfp213E9QAW0 468 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ppfibp2O35711 882 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tbx2Q60707 711 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 EregQ61521 162 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 LgsnQ8CIX8 563 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ssh3Q8K330 649 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ccdc80Q8R2G6 949 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Cul4bA2A432 970 aaKnown RBP10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gm382B1AXN3 1250 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Cpb1B2RS76 415 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Kif23E9Q5G3 953 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Rps6ka3P18654 740 aaKnown RBP10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ptpn12P35831 775 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Slc38a10Q5I012 1090 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Map3k12Q60700 888 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Zbtb17Q60821 794 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Znf513Q6PD29 541 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Snrnp35Q9D384 244 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Nek3Q9R0A5 511 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Ankrd2Q9WV06 328 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Peg12Q9WVA7 283 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Pex11aQ9Z211 246 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Casp12O08736 419 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 RpsaP14206 295 aaKnown RBP10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Dnm2P39054 870 aaKnown RBP10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Vps41Q5KU39 853 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Bola2Q8BGS2 86 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Snx10Q9CWT3 201 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Tns3Q5SSZ5 1440 aa10.28□□□□□ -0.76
Usp28-203ENSMUST00000213874 Exoc4O35382 975 aa10.27□□□□□ -0.76
Usp28-203ENSMUST00000213874 Gnat2P50149 354 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms