RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Gm4758L7N258 96 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rnf216P58283 853 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Adamts10P58459 1104 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp2c29Q64458 490 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ppp2r5bQ6PD28 497 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nod2Q8K3Z0 1020 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Kctd10Q922M3 315 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Trim59Q922Y2 403 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ripk3Q9QZL0 486 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 BcamQ9R069 622 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Mtmr7Q9Z2C9 660 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Fem1bQ9Z2G0 627 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Fndc3c1Q6DFV6 1356 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 AunipE9Q6Z5 340 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Phldb3E9QAF4 648 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Stra6O70491 670 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp2c37P56654 490 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tnni3kQ5GIG6 834 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Antxr2Q6DFX2 487 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp2c54Q6XVG2 490 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Bbs9Q811G0 885 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Entpd3Q8BFW6 529 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tdp1Q8BJ37 609 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 CrebrfQ8CDG5 640 aaKnown RBP9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Washc1Q8VDD8 475 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cyp2c50Q91X77 490 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Alpk1Q9CXB8 1231 aa9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tmx2Q9D710 295 aaKnown RBP9.49□□□□□ -0.89
Trim39-205ENSMUST00000173369 A0A0U1RNP2 1173 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nlrx1Q3TL44 975 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Xxylt1Q3U4G3 392 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cln3Q61124 438 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Slc9a1Q61165 820 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Grik5Q61626 979 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rnf208Q8K0W3 265 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Tmem60Q8K174 133 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Trib2Q8K4K3 343 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pqbp1Q91VJ5 263 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pcdhgc5Q91XW9 944 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ms4a4aA0A087WRT7 236 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nfx1B1AY10 1114 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rad51bO35719 350 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cops5O35864 334 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Zdhhc9P59268 364 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Morf4l1P60762 362 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Hspa8P63017 646 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 YdjcQ14BV6 310 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 PRAG1Q571I4 1179 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Prpf40bQ80W14 870 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ercc6lQ8BHK9 1240 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 MafaQ8CF90 359 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nat10Q8K224 1024 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ddx39aQ8VDW0 427 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Mrpl11Q9CQF0 192 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ccnt1Q9QWV9 724 aaKnown RBP9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ifi202Q9R002 445 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Sall1Q9ER74 1322 aa9.48□□□□□ -0.89
Trim39-205ENSMUST00000173369 Map7d2A2AG50 781 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nf2P46662 596 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Prdm4Q80V63 803 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Slc45a1Q8BIV7 751 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pgm5Q8BZF8 567 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pcdhac2Q91Y09 1006 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Slc39a2G3X943 309 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Lrrc32G3XA59 663 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gna11P21278 359 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Gabpb2P81069 414 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pla2g6P97819 807 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Lrrc14bQ3UJB3 510 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Dpp9Q8BVG4 862 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Zfp317Q8C0Q5 607 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 CnstQ8CBC4 711 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Htra3Q9D236 459 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Ccdc94Q9D6J3 314 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Cd274Q9EP73 290 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Nudt5Q9JKX6 218 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Hic1Q9R1Y5 733 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Twf2Q9Z0P5 349 aaKnown RBP9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Astn1Q61137 1302 aa9.47□□□□□ -0.89
Trim39-205ENSMUST00000173369 Pcif1P59114 706 aa9.46□□□□□ -0.89
Trim39-205ENSMUST00000173369 Fbxo33Q8VE08 562 aa9.46□□□□□ -0.89
Trim39-205ENSMUST00000173369 Sertad1Q9JL10 236 aa9.46□□□□□ -0.89
Trim39-205ENSMUST00000173369 Rabgap1A2AWA9 1064 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Akr1c19G3X9Y6 323 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 MarcksP26645 309 aaKnown RBP9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cnnm3Q32NY4 713 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Zfp957Q3UT76 567 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Zkscan1Q8BGS3 561 aaKnown RBP9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Zfp113Q8C689 439 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Btbd7Q8CFE5 1130 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ago4Q8CJF8 861 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Wasf1Q8R5H6 559 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Plekha4Q8VC98 588 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 GldcQ91W43 1025 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 F11Q91Y47 624 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Me2Q99KE1 589 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Pidd1Q9ERV7 915 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Ggps1Q9WTN0 300 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Cdc45Q9Z1X9 566 aa9.46□□□□□ -0.9
Trim39-205ENSMUST00000173369 Dock2Q8C3J5 1828 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 247.4 ms