RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Sec31aQ3UPL0 1230 aaKnown RBP11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 StilQ60988 1262 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Chmp2bQ8BJF9 213 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Suds3Q8BR65 328 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Klhl7Q8BUL5 586 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Slc13a4Q8BZ82 625 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Amotl2Q8K371 772 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Dnajc3Q91YW3 504 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ccdc105Q9D4K7 499 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 MajinQ9D992 256 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gdap1O88741 358 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ugt1a2P70691 533 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tbc1d2bQ3U0J8 965 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Arl2bpQ9D385 163 aa11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.19□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ctnnal1O88327 731 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ephb2P54763 986 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Asap3Q5U464 904 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tmem132eQ6IEE6 982 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Atp1a1Q8VDN2 1023 aaKnown RBP11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cfap57Q9D180 1249 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 NcstnP57716 708 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cdkl5Q3UTQ8 938 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Klhdc10Q6PAR0 439 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Washc1Q8VDD8 475 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Grin3bQ91ZU9 1003 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 PtpruB1AUH1 1446 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 CluhQ5SW19 1315 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Atp10bB1AWN4 1474 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ckap2Q3V1H1 664 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 GpkowQ56A08 488 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ces1eQ64176 562 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Klhl29Q80T74 875 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ppfia2Q8BSS9 1257 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gimap7Q8R379 293 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Pcdhb4Q91XZ6 784 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rnf4Q9QZS2 194 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Frmd7A2AD83 703 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ppp1r9aH3BJD6 1292 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Krt8P11679 490 aaKnown RBP11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Lrch1P62046 709 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 HnrnpdQ60668 355 aaKnown RBP11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Setdb2Q8C267 713 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Bola3Q8CEI1 110 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 DolkQ8R2Y3 534 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Wdr64Q9D565 1086 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Pdcd7Q9WTY1 482 aa11.18□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gm10378F6XQQ1 160 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Hap1O35668 628 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 PparaP23204 468 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Nhej1Q3KNJ2 295 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 SlmapQ3URD3 845 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cacna2d4Q5RJF7 1116 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cnga2Q62398 664 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ncapg2Q6DFV1 1138 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 NsmfQ99NF2 532 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Etnk1Q9D4V0 363 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Mrps9Q9D7N3 390 aaKnown RBP11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Myh7Q91Z83 1935 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 GakQ99KY4 1305 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Scgb2b21A0A087WQA9 112 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Fam129cD3YZB0 591 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Speer2E9Q9U2 264 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ccng1P51945 294 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tmtc1Q3UV71 942 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Myl10Q62082 202 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cep70Q6IQY5 616 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gpr139Q80UC8 345 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Lrrd1Q8C0R9 853 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gdap2Q9DBL2 498 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Dlg5E9Q9R9 1921 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Myh2G3UW82 1942 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Prl3d3A0A0M6L0J6 224 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tspyl3Q3UYP3 334 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Irf9Q61179 399 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Krt12Q64291 487 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rbm26Q6NZN0 1012 aaKnown RBP11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Rnf220Q6PDX6 566 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 WhrnQ80VW5 918 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tmco6Q8BQX5 494 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Shtn1Q8K2Q9 631 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Zcchc8Q9CYA6 709 aaKnown RBP11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 MrgbpQ9DAT2 204 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Cd2apQ9JLQ0 637 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Fam50bQ9WTJ8 334 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Foxo3Q9WVH4 672 aa11.17□□□□□ -0.62
Ctc1-202ENSMUST00000116359 NalcnQ8BXR5 1738 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Tnnc1P19123 161 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 GnaqP21279 359 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Gsdma3Q5Y4Y6 464 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Naa15Q80UM3 865 aaKnown RBP11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Fsip1Q9D3V5 435 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 GdaQ9R111 454 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Sorbs3Q9R1Z8 733 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Psma7Q9Z2U0 248 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ddx60E9PZQ1 1711 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Abcc10Q8R4P9 1501 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Timm10P62073 90 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Ect2Q07139 913 aa11.16□□□□□ -0.62
Ctc1-202ENSMUST00000116359 Nlrp9bQ66X22 1003 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms