RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Fbxo28Q8BIG4 368 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Zhx2Q8C0C0 836 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ccdc150Q8CDI7 1110 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Havcr2Q8VIM0 281 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pqbp1Q91VJ5 263 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Iqca1Q9CUL5 857 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Alpk1Q9CXB8 1231 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tmx2Q9D710 295 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pramel3A2AHA7 463 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm7903A2AWL1 463 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 AV320801A2AWL3 467 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm15448F6PZL4 682 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm15023L7MUB4 467 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Parp1P11103 1013 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pcmtd1P59913 357 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Snap25P60879 206 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Lrrd1Q8C0R9 853 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 CrebrfQ8CDG5 640 aaKnown RBP14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Naa30Q8CES0 364 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Zswim3Q8CFL8 695 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ppp2r5dQ91V89 594 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Anapc4Q91W96 807 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Serpinb3bQ9D1Q5 387 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 4921524L21RikQ9D5T2 438 aa14.06□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm43738A0A0G2JEA5 862 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Cspp1B2RX88 1205 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gml2G5E8L7 176 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 FosP01101 380 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 LtkP08923 888 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gtf2f1Q3THK3 508 aaKnown RBP14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ccdc189Q6NZQ0 333 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pcdhb14Q6PB90 796 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Znf653Q6YND2 615 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Recql4Q75NR7 1216 aaKnown RBP14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Brd2Q7JJ13 798 aaKnown RBP14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Slc4a8Q8JZR6 1089 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Nod2Q8K3Z0 1020 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ero1aQ8R180 464 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 AdpgkQ8VDL4 496 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tdrd3Q91W18 743 aaKnown RBP14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 DaglbQ91WC9 669 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Smc1bQ920F6 1248 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 SerhlQ9EPB5 311 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Sh3bgrQ9WUZ7 214 aa14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 AdnpQ9Z103 1108 aaKnown RBP14.05□□□□□ -0.16
Trim50-202ENSMUST00000111180 Sbf1Q6ZPE2 1867 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Wfdc16A2A5H4 111 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Rabgap1A2AWA9 1064 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm9992B2RWK3 458 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 March10E9PX79 788 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm3138K7N754 218 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Btbd1P58544 488 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Map4k1P70218 827 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Unc93aQ710D3 458 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 PhkbQ7TSH2 1085 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Rec8Q8C5S7 591 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 DnerQ8JZM4 737 aa14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 NkapQ9D0F4 415 aaKnown RBP14.04□□□□□ -0.16
Trim50-202ENSMUST00000111180 Wnt7aP24383 349 aa14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Jakmip3Q5DTN8 844 aa14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Prpf4bQ61136 1007 aaKnown RBP14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Tpd52Q62393 224 aa14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gpbp1l1Q6NZP2 473 aa14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Apobec3Q99J72 440 aaKnown RBP14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 TnmdQ9EP64 317 aa14.03□□□□□ -0.16
Trim50-202ENSMUST00000111180 Syce3B5KM66 88 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Slc6a20bO88575 635 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Lig1P37913 916 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Stat3P42227 770 aaKnown RBP14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Rrp1P56183 494 aaKnown RBP14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Pfkfb1P70266 471 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Meis2P97367 477 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Kiaa1468Q148V7 1216 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Fscn2Q32M02 492 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Ptpn18Q61152 453 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Krt87Q6IMF0 495 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Hdac4Q6NZM9 1076 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Taok2Q6ZQ29 1240 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Hook1Q8BIL5 728 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Haus7Q8BKT8 364 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Larp6Q8BN59 492 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Senp7Q8BUH8 1037 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Vps53Q8CCB4 832 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Bclaf1Q8K019 919 aaKnown RBP14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Kbtbd4Q8R179 534 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Dnajc17Q91WT4 303 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 4931400O07RikQ9D4M5 137 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Cmtm5Q9D6G9 156 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Q9DAQ4 598 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Arpp21Q9DCB4 807 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Mtmr9Q9Z2D0 545 aa14.02□□□□□ -0.16
Trim50-202ENSMUST00000111180 Gm7356A0A087WSA6 508 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Map7d1A2AJI0 846 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Arhgap4B1AUY3 965 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Dapk3O54784 448 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Cdh15P33146 784 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Cdc25aP48964 514 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Hmgcs2P54869 508 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Nploc4P60670 608 aa14.01□□□□□ -0.17
Trim50-202ENSMUST00000111180 Eif3j2Q66JS6 263 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms