RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Ddx39aQ8VDW0 427 aaKnown RBP10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cfap221A9Q751 836 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Gucy2eP52785 1108 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Irx1P81068 480 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rapgef5Q8C0Q9 814 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ccz1Q8C1Y8 480 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 3830403N18RikQ9D6C3 208 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Slc13a1Q9JHI4 594 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Slc12a7Q9WVL3 1083 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cyp3a57D3YYZ0 503 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tsta3P23591 321 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 NpeppsQ11011 920 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ces3aQ63880 571 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ankfy1Q810B6 1169 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ces3bQ8VCU1 571 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Frmd4bQ920B0 1035 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Apopt1Q9CQW7 192 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Dusp10Q9ESS0 483 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Bnip3lQ9Z2F7 218 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Plekhg1F6S200 1446 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Casp14O89094 257 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Sik1Q60670 779 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tbc1d30Q69ZT9 766 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Adat2Q6P6J0 191 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Trim56Q80VI1 734 aaKnown RBP10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cabcoco1Q8CDT7 208 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Znf467Q8JZL0 594 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Plch2A2AP18 1501 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Zfp94E9Q6Y4 486 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Phf20l1Q8CCJ9 1013 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Nkiras1Q8CEC5 192 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Lsm14bQ8CGC4 385 aaKnown RBP10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rabep2Q91WG2 554 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Mfap3lQ9D3X9 409 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rfwd2Q9R1A8 733 aaKnown RBP10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Wdr17E9Q271 1322 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Q8CEZ4 452 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Nuf2Q99P69 463 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Nr2e3Q9QXZ7 395 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Myo1cQ9WTI7 1063 aa10.18□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Fam81aQ3UXZ6 364 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Pabpc4Q6PHQ9 660 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 1700109H08RikQ9D9C0 210 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 OcrlQ6NVF0 900 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tmem132dQ76HP3 1097 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 XpcP51612 930 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Actn4P57780 912 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 OtulinQ3UCV8 352 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Meis1Q60954 390 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Kcna6Q61923 529 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ppfia2Q8BSS9 1257 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Dbndd2Q9CRD4 158 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rab20P35295 233 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 TfrcQ62351 763 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Q9DAQ4 598 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Trmt112Q9DCG9 125 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tcof1O08784 1320 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Nup160Q9Z0W3 1402 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Gm45194A0A140LJG2 572 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Dnaaf5B9EJR8 853 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tnnc2P20801 160 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Gfpt1P47856 697 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Atp8b1Q148W0 1251 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Srrm1Q52KI8 946 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Kctd1Q5M956 257 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 GartQ64737 1010 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Dcaf5Q80T85 946 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ddx19bQ8BZY3 494 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Trim7Q923T7 510 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Hic2Q9JLZ6 619 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Aldh18a1Q9Z110 795 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Mroh6V9GX81 722 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Mmrn1B2RPV6 1210 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Gimd1E9PW74 217 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rad51bO35719 350 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ric8aQ3TIR3 530 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cep85Q8BMK0 761 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Lmbrd1Q8K0B2 537 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Krt27Q9Z320 448 aa10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Fam208aQ69ZR9 1610 aaKnown RBP10.17□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Clasp1Q80TV8 1535 aaKnown RBP10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ap1g2O88512 791 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Hcls1P49710 486 aaKnown RBP10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Hps5P59438 1126 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Arhgap10Q6Y5D8 786 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Smim5Q8BT42 78 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ccdc15Q8C9M2 810 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Arhgap18Q8K0Q5 663 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 NkapQ9D0F4 415 aaKnown RBP10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 4931423N10RikQ9D4J9 382 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Usp53P15975 1069 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Fam228bQ497Q6 232 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Nab2Q61127 525 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cyp26b1Q811W2 512 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Slc17a8Q8BFU8 601 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Rbbp5Q8BX09 538 aaKnown RBP10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Pm20d1Q8C165 503 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Mms19Q9D071 1031 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cfap70D3YVL2 1141 aa10.16□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Pcdha4O88689 947 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms