RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Slc44a4Q91VA1 707 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Osbpl1aQ91XL9 950 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Kremen1Q99N43 473 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Saal1Q9D2C2 474 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sertad1Q9JL10 236 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 GsdmeQ9Z2D3 512 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mast2Q60592 1734 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ppfia4B8QI36 1187 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gna11P21278 359 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hdhd2Q3UGR5 259 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Krt42Q6IFX2 452 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Adcy2Q80TL1 1090 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sdccag8Q80UF4 717 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tmem179Q8BHH9 233 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Prl7b1Q8CGZ9 251 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cdk8Q8R3L8 464 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc51Q3URS9 406 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 PRAG1Q571I4 1179 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Exoc3Q6KAR6 755 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tlr11Q6R5P0 926 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mxd3Q80US8 206 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ankrd24Q80VM7 985 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rufy1Q8BIJ7 712 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Slc51aQ8R000 340 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 HyiQ8R1F5 277 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hps4Q99KG7 671 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Fam173bQ9D1Z3 247 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rwdd2aQ9D9S3 292 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Trmt112Q9DCG9 125 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sec14l1A8Y5H7 715 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nap1l1P28656 391 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Akr1b1P45376 316 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Spg7Q3ULF4 781 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sco1Q5SUC9 284 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rhpn1Q61085 643 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mapk6Q61532 720 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Haus4Q8BFT2 363 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Morc2bQ8C5W4 1022 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Onecut3Q8K557 490 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 GzmnQ920S1 248 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Acot3Q9QYR7 432 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Spocd1B1ASB6 936 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Arhgap6O54834 987 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nap1l2P51860 460 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 HmmrQ00547 794 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sf3b2Q3UJB0 878 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Zbtb39Q6PDK0 712 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tlr13Q6R5N8 991 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tcp10aQ80W76 438 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Armcx3Q8BHS6 379 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tbc1d23Q8K0F1 684 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gtf3c5Q8R2T8 520 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ifih1Q8R5F7 1025 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Eef1gQ9D8N0 437 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Duox1A2AQ92 1551 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 C2cd2E9Q3C1 696 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 DnttP09838 530 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Lig1P37913 916 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc157Q5SPX1 718 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Kcnj11Q61743 390 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sh3gl1Q62419 368 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ankrd13aQ80UP5 588 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Camsap3Q80VC9 1252 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Znf526Q8BI66 675 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 NkrfQ8BY02 690 aaKnown RBP10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tut1Q8R3F9 869 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Asic2Q925H0 512 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 1700020D05RikQ99PB1 294 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Golph3Q9CRA5 298 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ppp1r3gQ9CW07 347 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Stx17Q9D0I4 301 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cmtr1Q9DBC3 837 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 SyncQ9EPM5 470 aa10.84□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gad1P48318 593 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Lilrb3P97484 841 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Zrsr2Q62377 462 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 March6Q6ZQ89 909 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Creb3l3Q91XE9 479 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 PtgdrP70263 357 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kctd19Q562E2 927 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 NntQ61941 1086 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Krt74Q6IFZ9 495 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 OplahQ8K010 1288 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Mmgt1Q8K273 131 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 HmcesQ8R1M0 353 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Krt79Q8VED5 531 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Kctd10Q922M3 315 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ubxn6Q99PL6 442 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 UvssaQ9D479 717 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Ccnt1Q9QWV9 724 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Dock5B2RY04 1868 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Zscan18E9PUD6 809 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Il27raO70394 623 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Tcp1P11983 556 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Cd44P15379 778 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Nedd4P46935 887 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Surf6P70279 355 aaKnown RBP10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Serpinb6dQ3UWK8 375 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Arid3aQ62431 601 aa10.83□□□□□ -0.68
Ccdc40-202ENSMUST00000053440 Grm4Q68EF4 912 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms