RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Fnbp1Q80TY0 616 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Q8BWG4 1187 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Exd1Q8CDF7 570 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Prl7b1Q8CGZ9 251 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rbm41Q8JZV4 413 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ubxn1Q922Y1 297 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Srfbp1Q9CZ91 441 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Smco2Q9DA21 347 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ecm29Q6PDI5 1840 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm5134E9QAB5 671 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 CltaO08585 235 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 InhbeO08717 350 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tex11Q14AT2 947 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ddx17Q501J6 650 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 GapdhsQ64467 440 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Antxr2Q6DFX2 487 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ube3cQ80U95 1083 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Srrm3Q80WV7 648 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Trpa1Q8BLA8 1125 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cep95Q8BVV7 827 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ufl1Q8CCJ3 793 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cdk17Q8K0D0 523 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cap2Q9CYT6 476 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nacc2Q9DCM7 586 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gucy1a2F8VQK3 730 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 RaraP11416 462 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 SarsP26638 512 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Opa1P58281 960 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 TchpQ3TVW5 497 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cyp24a1Q64441 514 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 F13a1Q8BH61 732 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mtfr1lQ9CWE0 289 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 JcadQ5DTX6 1320 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Sec14l1A8Y5H7 715 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm6588E9Q3K0 461 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Trim80Q3V061 624 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Soat1Q61263 540 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 TufmQ8BFR5 452 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Micall1Q8BGT6 870 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rassf2Q8BMS9 326 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 P3h4Q8K2B0 443 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nip7Q9CXK8 180 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Actn2Q9JI91 894 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Klra17Q9JMA4 273 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Clip2Q9Z0H8 1047 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm1993A6X8I0 212 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 SlxD3Z347 212 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Snrpa1P57784 255 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myo1fP70248 1099 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Skap2Q3UND0 358 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tmtc2Q56A06 836 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gbp9Q8BTS3 619 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Arap2Q8BZ05 1703 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ccser1Q8C0C4 895 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ildr1Q8CBR1 537 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pspc1Q8R326 523 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ushbp1Q8R370 680 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Washc1Q8VDD8 475 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Efhd1Q9D4J1 240 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Clstn1Q9EPL2 979 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Jph2Q9ET78 696 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ddx23D3Z0M9 819 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm10354K7N6A0 256 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Slc9a2Q3ZAS0 814 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rc3h1Q4VGL6 1130 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ehmt1Q5DW34 1296 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 EsrrbQ61539 433 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Clec4gQ8BNX1 294 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Atp1a1Q8VDN2 1023 aaKnown RBP9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Foxo4Q9WVH3 505 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Thsd7aQ69ZU6 1645 aa9.1□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm28510A0A087WP28 240 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Etnk2A7MCT6 385 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ccdc24E9PUW8 296 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Prl7d1P04769 244 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nr5a1P33242 462 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rasa2P58069 847 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 HmmrQ00547 794 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ift20Q61025 132 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cep70Q6IQY5 616 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 QarsQ8BML9 775 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tbl3Q8C4J7 801 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 CntrobQ8CB62 887 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Krt82Q99M74 516 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gkap1Q9JMB0 366 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Sorbs3Q9R1Z8 733 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pnpla6Q3TRM4 1355 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pcdh11xF6ZNL5 1338 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm1758F6VZZ1 202 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Xirp1O70373 1129 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nr1d1Q3UV55 615 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Retreg2Q6NS82 541 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ccp110Q7TSH4 1004 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Wdr35Q8BND3 1181 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Spata2Q8K004 515 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tdrd7Q8K1H1 1086 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Stn1Q8K2X3 378 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Lrrc42Q8R2U7 421 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Plagl2Q925T4 496 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Bap1Q99PU7 728 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms