RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Nfil3O08750 462 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gfpt1P47856 697 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gcnt1Q09324 428 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Skap1Q3UUV5 355 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Rhpn1Q61085 643 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Haus4Q8BFT2 363 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gja10Q9WUS4 505 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Clip2Q9Z0H8 1047 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Plekhg2Q6KAU7 1340 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 NesQ6P5H2 1864 aaKnown RBP21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Myh8P13542 1937 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 CltaO08585 235 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Prl2c3P04768 224 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Dlg1Q811D0 905 aaKnown RBP21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Kctd3Q8BFX3 815 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ttc7aQ8BGB2 858 aa21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Pym1Q8CHP5 203 aaKnown RBP21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Luc7lQ9CYI4 371 aaKnown RBP21.1■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 E9QMW4 1145 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Usp53P15975 1069 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Pdrg1P59048 133 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 PtgdrP70263 357 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Pstpip1P97814 415 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 HmmrQ00547 794 aaKnown RBP21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Znf667Q2TL60 609 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Tlr13Q6R5N8 991 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Rbm19Q8R3C6 952 aaKnown RBP21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Sorbs3Q9R1Z8 733 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Sel1lQ9Z2G6 790 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Tmem132bF7BAB2 1078 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Nr1i3O35627 358 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Stat4P42228 749 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Jdp2P97875 163 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Gas1Q01721 343 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Arhgef2Q60875 985 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Lrrc15Q80X72 579 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 AopepQ8BXQ6 817 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Usp27Q8CEG8 438 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Spata2Q8K004 515 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Amhr2Q8K592 568 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ndufv1Q91YT0 464 aa21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 SetQ9EQU5 289 aaKnown RBP21.09■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ptpn12P35831 775 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Opa1P58281 960 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Senp1P59110 640 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Spg7Q3ULF4 781 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Serpinb6dQ3UWK8 375 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Ift20Q61025 132 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 H6pdQ8CFX1 789 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Lonrf3Q9D4H7 753 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 CenphQ9QYM8 241 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Slc26a4Q9R155 780 aa21.08■□□□□ 0.97
Ccdc50-201ENSMUST00000039443 Lamb1P02469 1786 aa21.08■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Gm36210A0A1B0GS00 229 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Nsrp1Q5NCR9 542 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Tsg101Q61187 391 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 PnocQ64387 187 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Galnt17Q7TT15 598 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 RragaQ80X95 313 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 3830417A13RikQ8BQJ2 303 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Psmd2Q8VDM4 908 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Lgr5Q9Z1P4 907 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Ccdc88aQ5SNZ0 1873 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Akr1c19G3X9Y6 323 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Rps8P62242 208 aaKnown RBP21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Pla2g4eQ50L42 875 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Usp17leQ7M764 540 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Fnbp1Q80TY0 616 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Sumf1Q8R0F3 372 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 TbcbQ9D1E6 244 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Tktl2Q9D4D4 627 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Rbm6S4R1W5 1118 aaKnown RBP21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Col11a2Q64739 1736 aa21.07■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 F13a1Q8BH61 732 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Vcpip1Q8CDG3 1220 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Tmem47Q9JJG6 181 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Nfu1Q9QZ23 255 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Trim30cD3YVI9 513 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Pnma5Q5DTT8 618 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Gas8Q60779 478 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Baiap3Q80TT2 1134 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Naa15Q80UM3 865 aaKnown RBP21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Ccdc181Q80ZU5 509 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Rasgrp4Q8BTM9 673 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Arpp21Q9DCB4 807 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Epb41l3Q9WV92 929 aa21.06■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Heg1E9Q7X6 1337 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Aak1Q3UHJ0 959 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Kif22Q3V300 660 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Mdh1bQ5F204 500 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Secisbp2lQ6A098 1086 aaKnown RBP21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Epha10Q8BYG9 1007 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Slc9b1Q8C0X2 565 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Pak2Q8CIN4 524 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Rwdd2aQ9D9S3 292 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Fxr2Q9WVR4 673 aaKnown RBP21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Zmym2Q9CU65 1376 aa21.05■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Pabpc1lA2A5N3 607 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 LdhaP06151 332 aaKnown RBP21.04■□□□□ 0.96
Ccdc50-201ENSMUST00000039443 Abcb4P21440 1276 aa21.04■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms