RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Ppp2r5cQ60996 524 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Fxr1Q61584 677 aaKnown RBP18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Acad11Q80XL6 779 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Csgalnact2Q8C1F4 542 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pcdhb12Q91Y07 789 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 CsadQ9DBE0 493 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cdk12Q14AX6 1484 aaKnown RBP18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 EgfrQ01279 1210 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tfcp2l1Q3UNW5 479 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Lamc2Q61092 1191 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 McamQ8R2Y2 648 aaKnown RBP18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 4921530L21RikQ9CQ47 274 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Hic2Q9JLZ6 619 aaKnown RBP18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Sfi1Q3UZY0 1216 aaKnown RBP18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Wdr44Q6NVE8 915 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Meis1Q60954 390 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cd248Q91V98 765 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 BaatQ91X34 420 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Creb3l3Q91XE9 479 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pde6cQ91ZQ1 861 aa18.07■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Rab11fip4Q8BQP8 635 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Eif4a3Q91VC3 411 aaKnown RBP18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tex21Q9R0U9 575 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Depdc5P61460 1591 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Gm28042B7ZCM9 1014 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pja2Q80U04 707 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cnot10Q8BH15 744 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 6820408C15RikQ8BJX2 354 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pih1h3bQ8C6P5 218 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ndst4Q9EQW8 872 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Fam207aP58468 219 aaKnown RBP18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ppp1r13bQ62415 1087 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 GartQ64737 1010 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Stk38lQ7TSE6 464 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cyp2d12Q8BVD2 504 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cdk8Q8R3L8 464 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Zfp94E9Q6Y4 486 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pla2g4eQ50L42 875 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 LgsnQ8CIX8 563 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Slc12a8Q8VI23 705 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Synpo2Q91YE8 1087 aaKnown RBP18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tmem132aQ922P8 1018 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Serpinb3bQ9D1Q5 387 aa18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ccdc124Q9D8X2 217 aaKnown RBP18.06■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Serpini1O35684 410 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Xxylt1Q3U4G3 392 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ppp1r7Q3UM45 361 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 IqceQ6PCQ0 778 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ppp1r37Q8BKR5 712 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 CoasyQ9DBL7 563 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 MefvQ9JJ26 767 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 RpgrQ9R0X5 1001 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cep170Q6A065 1588 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Apol6B7ZC55 329 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Eepd1Q3TGW2 569 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Nab2Q61127 525 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Krt74Q6IFZ9 495 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Serpinb6eI7HJI3 429 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ms4a2P20490 235 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Sema3eP70275 775 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Usp44Q8C2S0 711 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Arl6ip4Q9JM93 229 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Gja8P28236 440 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 MpndQ3TV65 487 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Rassf10Q8BL43 508 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Strip1Q8C079 837 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 MgarpQ8VI64 283 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ankrd2Q9WV06 328 aa18.05■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Lonrf2B2RT44 518 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 PigsQ6PD26 555 aaKnown RBP18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ces1Q8VCC2 565 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Cdc26Q99JP4 85 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Znf521Q6KAS7 1311 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ifi207E9Q3L4 978 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Gm1661E9Q963 441 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Serpinb8O08800 374 aaKnown RBP18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 EnahQ03173 802 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Pramel6Q810Y9 485 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Srp68Q8BMA6 625 aaKnown RBP18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Anapc5Q8BTZ4 740 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Syap1Q9D5V6 365 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tph1P17532 447 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tfdp1Q08639 410 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Q80ZQ3 298 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Dars2Q8BIP0 653 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Atp5c1Q91VR2 298 aaKnown RBP18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Osbpl1aQ91XL9 950 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Popdc2Q9ES82 367 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Slc12a7Q9WVL3 1083 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Lrriq1Q0P5X1 1673 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Tmed8Q3UHI4 326 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ckap2Q3V1H1 664 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 WaslQ91YD9 501 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Gfpt2Q9Z2Z9 682 aa18.04■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Ulk4Q3V129 1303 aa18.03■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Adssl1P28650 457 aa18.03■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Krt40Q6IFX3 439 aa18.03■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Psmg1Q9JK23 289 aa18.03■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Eef1bO70251 225 aaKnown RBP18.03■□□□□ 0.48
Ubfd1-201ENSMUST00000033158 Slc9a1Q61165 820 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms