RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 HnrnpmQ9D0E1 729 aaKnown RBP12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 CenphQ9QYM8 241 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Twf2Q9Z0P5 349 aaKnown RBP12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Btbd19S4R1I0 287 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Scgb2b12S4R2L0 112 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Col14a1Q80X19 1797 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gm21698A0A087WQP8 267 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gm21663A0A0G2JE01 267 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Card9A2AIV8 536 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gm7347D3YYI9 267 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 5031410I06RikE9Q4E0 267 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Casp14O89094 257 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Rag1P15919 1040 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ect2Q07139 913 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Acsbg2Q2XU92 667 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 StimateQ3UF25 288 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 P2rx3Q3UR32 397 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Fam8a1Q3URQ4 399 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ltv1Q6NSQ7 470 aaKnown RBP12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Klhl29Q80T74 875 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Wasf2Q8BH43 497 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Agap1Q8BXK8 857 aaKnown RBP12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Inpp5fQ8CDA1 1132 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 TraipQ8VIG6 470 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 NcaldQ91X97 193 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Fkbp6Q91XW8 327 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Nsmce3Q9CPR8 279 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Zcchc8Q9CYA6 709 aaKnown RBP12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ift43Q9DA69 206 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Adam23Q9R1V7 829 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Efcab6Q6P1E8 1516 aa12.61□□□□□ -0.39
Trim55-201ENSMUST00000029139 Rtl9Q32KG4 1339 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Akr1b10G5E895 316 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Akap1O08715 857 aaKnown RBP12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gucy1b3O54865 620 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 AladP10518 330 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Bend4P86174 541 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gpr150Q8BL07 427 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Slain2Q8CI08 581 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Atp2a1Q8R429 994 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Slc35f6Q8VE96 372 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Atp5dQ9D3D9 168 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Mfap3lQ9D3X9 409 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ubxn11Q9D572 484 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Tmem191cQ9JJB1 302 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Stk39Q9Z1W9 556 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 1700018F24RikB2RW27 314 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Lrch1P62046 709 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Calb2Q08331 271 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ddb1Q3U1J4 1140 aaKnown RBP12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 KizQ3UXL4 695 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Terb1Q8C0V1 768 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 VarsQ9Z1Q9 1263 aaKnown RBP12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Lrrc7Q80TE7 1490 aa12.6□□□□□ -0.39
Trim55-201ENSMUST00000029139 Arfgef2A2A5R2 1792 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Zfp626A0A0U1RQ84 676 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ifit3bE9PV48 403 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Parp1P11103 1013 aaKnown RBP12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 HpcaP84075 193 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Lrrc43Q3V0L5 667 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ankrd40Q5SUE8 363 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Xlr3aQ60595 226 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Nab2Q61127 525 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Krt77Q6IFZ6 572 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Zpbp2Q6X786 326 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Kdm1aQ6ZQ88 853 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 F13a1Q8BH61 732 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Paip2bQ91W45 136 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 BrdtQ91Y44 956 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Tktl2Q9D4D4 627 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gabbr1Q9WV18 960 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ccdc163A2AGD7 326 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Cylc2B1AWN8 422 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Gm3636E9Q5P1 227 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 FesP16879 822 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Aimp1P31230 310 aaKnown RBP12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Pth1rP41593 591 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Stat1P42225 749 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Tmod1P49813 359 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Cct6aP80317 531 aaKnown RBP12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Sox13Q04891 613 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Secisbp2lQ6A098 1086 aaKnown RBP12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ppp2r2aQ6P1F6 447 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ggt6Q6PDE7 497 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 E330017A01RikQ8BU47 192 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Ssfa2Q922B9 1252 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Tmco5aQ9D9D5 303 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Pdcd7Q9WTY1 482 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 NalcnQ8BXR5 1738 aa12.59□□□□□ -0.39
Trim55-201ENSMUST00000029139 Oprl1P35377 367 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Kcna2P63141 499 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 HmmrQ00547 794 aaKnown RBP12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ncoa4Q5U4H9 625 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ezh2Q61188 746 aaKnown RBP12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Ddx11Q6AXC6 880 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Lrrn2Q6PHP6 730 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 PdhxQ8BKZ9 501 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Snx8Q8CFD4 459 aa12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Rbm28Q8CGC6 750 aaKnown RBP12.58□□□□□ -0.4
Trim55-201ENSMUST00000029139 Eps8l2Q99K30 729 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms