RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 VimP20152 466 aaKnown RBP11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Q32P12 615 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Slc2a13Q3UHK1 637 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Slc30a9Q5IRJ6 567 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Enox1Q8BHR2 643 aaKnown RBP11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ccdc14Q8K2J4 934 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ttc8Q8VD72 515 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Trex1Q91XB0 314 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Sertad1Q9JL10 236 aa11.96□□□□□ -0.49
Msh3-201ENSMUST00000022220 Dnaaf5B9EJR8 853 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 RragaQ80X95 313 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 Kctd3Q8BFX3 815 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 Zkscan3Q91VW9 553 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ctnnbl1Q9CWL8 563 aaKnown RBP11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 TbcbQ9D1E6 244 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 AacsQ9D2R0 672 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tns2Q8CGB6 1400 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 4931408C20RikE9PWP9 1381 aa11.96□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sipa1l2Q80TE4 1722 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nsrp1Q5NCR9 542 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Myo19Q5SV80 963 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 D130040H23RikQ8BII3 405 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ddx19bQ8BZY3 494 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sh3bp5lQ99LH9 392 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Efhd1Q9D4J1 240 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mad2l2Q9D752 211 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sipa1l1Q8C0T5 1782 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 ErmardE9Q048 622 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Akap2O54931 893 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Bnip3O55003 187 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Hps5P59438 1126 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Stim2P83093 746 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Rtkn2Q14B46 604 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Zmym1Q3TJB1 983 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ezh2Q61188 746 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Fkbp3Q62446 224 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ms4a5Q810P8 197 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mis18aQ9CZJ6 204 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Smco2Q9DA21 347 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cd2apQ9JLQ0 637 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Fut8Q9WTS2 575 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nfat5Q9WV30 1534 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gm28919A0A087WP35 240 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Pus7B7ZNL8 666 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 ByslO54825 436 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Traf5P70191 558 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Hnrnph2P70333 449 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Krt86P97861 486 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Kiaa1468Q148V7 1216 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gucy2cQ3UWA6 1072 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Zfp341Q6PGC9 846 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Scyl2Q8CFE4 930 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tdrd3Q91W18 743 aaKnown RBP11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 PdhbQ9D051 359 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mfap3lQ9D3X9 409 aa11.95□□□□□ -0.5
Msh3-201ENSMUST00000022220 Adssl1P28650 457 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Jade3Q6IE82 823 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Vnn1Q9Z0K8 512 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cyp2c69E9PXC3 491 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nck2O55033 380 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tph1P17532 447 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cyp2c40P56657 491 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Il17raQ60943 864 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Krt14Q61781 484 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Camsap3Q80VC9 1252 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ankrd24Q80VM7 985 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Epha10Q8BYG9 1007 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Morc2bQ8C5W4 1022 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ubxn1Q922Y1 297 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Myo1hQ9D6A1 958 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gm5580A0A0N4SVP8 411 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gm28042B7ZCM9 1014 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 P4hbP09103 509 aaKnown RBP11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Tal1P22091 329 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Traf1P39428 409 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Epha2Q03145 977 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Galnt17Q7TT15 598 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Armcx3Q8BHS6 379 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Slc51aQ8R000 340 aa11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 NkapQ9D0F4 415 aaKnown RBP11.94□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nek1P51954 1203 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 EgfrQ01279 1210 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Prpf40bQ80W14 870 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ddx39aQ8VDW0 427 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ppp2r5dQ91V89 594 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Coa7Q921H9 231 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Krt34Q9D646 392 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Cdc27A2A6Q5 825 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Idh1O88844 414 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Sstr3P30935 428 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nedd4P46935 887 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Opa1P58281 960 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gpr162Q3UN16 588 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Specc1Q5SXY1 1067 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Gas8Q60779 478 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Mrps31Q61733 384 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Spats2Q8K1N4 545 aaKnown RBP11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Filip1Q9CS72 1211 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Nek3Q9R0A5 511 aa11.93□□□□□ -0.5
Msh3-201ENSMUST00000022220 Ddx23D3Z0M9 819 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms