RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Slc38a10Q5I012 1090 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Sycp1Q62209 993 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Sh3gl3Q62421 347 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Esco1Q69Z69 843 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Slf2Q6P9P0 1278 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Txndc16Q7TN22 820 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cnot10Q8BH15 744 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Zdhhc14Q8BQQ1 489 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Olfm5Q8BU90 496 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 RadxQ8C779 850 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Rhobtb3Q9CTN4 611 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Pold4Q9CWP8 107 aa13.33□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Gm1993A6X8I0 212 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 SlxD3Z347 212 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Shox2P70390 331 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Traf3ip1Q149C2 625 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Psmd1Q3TXS7 953 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cep131Q62036 1060 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Asic3Q6X1Y6 530 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Podxl2Q8CAE9 603 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Rbm28Q8CGC6 750 aaKnown RBP13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Exoc1Q8R3S6 894 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 CenphQ9QYM8 241 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Nfs1Q9Z1J3 459 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Kank3Q9Z1P7 791 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Myh4Q5SX39 1939 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Frmpd4A2AFR3 1320 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tex13cD3YU32 604 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Anxa1P10107 346 aaKnown RBP13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Msh3P13705 1091 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ctnnd1P30999 938 aaKnown RBP13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Nf2P46662 596 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 ArsiQ32KI9 573 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Q32P12 615 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cyfip2Q5SQX6 1253 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cplx4Q80WM3 160 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ttc22Q8C159 568 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Pus7lQ8CE46 702 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ubac1Q8VDI7 409 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Apobec3Q99J72 440 aaKnown RBP13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 1700109H08RikQ9D9C0 210 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Dydc1Q9D9T0 175 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Net1Q9Z206 595 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Golgb1E9PVZ8 3238 aa13.32□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Dock5B2RY04 1868 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Magea10A2AMW4 325 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Pfkfb3A7UAK5 555 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Bin2D3Z6Q9 489 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Exoc4O35382 975 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Becn2P0DM65 447 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Usp4P35123 962 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Stat4P42228 749 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Snai1Q02085 264 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Lrrc55Q3UY51 311 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Exoc3Q6KAR6 755 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Slf1Q8R3P9 1054 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tor1aip1Q921T2 595 aaKnown RBP13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Slc12a6Q924N4 1150 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Eps8l2Q99K30 729 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ndufb9Q9CQJ8 179 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ccdc43Q9CR29 222 aaKnown RBP13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 SarnpQ9D1J3 210 aaKnown RBP13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Arl2bpQ9D385 163 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Tlr9Q9EQU3 1032 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 StrcQ8VIM6 1809 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Speer4dL7N216 212 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Trappc3O55013 180 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 XlrP05531 208 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Hsd17b1P51656 344 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Olfr118Q7TRJ6 321 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Scfd2Q8BTY8 684 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 IarsQ8BU30 1262 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 PreplQ8C167 725 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ccdc134Q8C7V8 229 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Vcpip1Q8CDG3 1220 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Mettl5Q8K1A0 209 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 HyiQ8R1F5 277 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Eif4a3Q91VC3 411 aaKnown RBP13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Mmtag2Q99LX5 260 aaKnown RBP13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ppp1r3gQ9CW07 347 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 ArcQ9WV31 396 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Letm1Q9Z2I0 738 aa13.31□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ddx23D3Z0M9 819 aaKnown RBP13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cacna2d1O08532 1103 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 D1Pas1P16381 660 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Lmnb2P21619 596 aaKnown RBP13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 RxrbP28704 520 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Gjb4Q02738 266 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Fkbp3Q62446 224 aaKnown RBP13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Pde1cQ64338 706 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Dnajc8Q6NZB0 253 aaKnown RBP13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Cyp4f39Q8BGU0 532 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 CgasQ8C6L5 507 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Znf131Q8K3J5 619 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 FktnQ8R507 461 aa13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 HdlbpQ8VDJ3 1268 aaKnown RBP13.3□□□□□ -0.28
Ufd1-201ENSMUST00000005394 A0A1Y7VML8 143 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Prdm11A2AGX3 565 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Ccdc24E9PUW8 296 aa13.29□□□□□ -0.28
Ufd1-201ENSMUST00000005394 Nr1i3O35627 358 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms