RNA–Protein interactions for RNA: YOR275C

RIM20, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM20, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM20	YOR275C	PEX21	P50091	288 aa		4.89	□□□□□ -1.63
RIM20	YOR275C	CST6	P40535	587 aa		4.86	□□□□□ -1.63
RIM20	YOR275C	YPR109W	Q06104	294 aa		4.86	□□□□□ -1.63
RIM20	YOR275C	TRK1	P12685	1235 aa		4.84	□□□□□ -1.63
RIM20	YOR275C	CLA4	P48562	842 aa		4.84	□□□□□ -1.63
RIM20	YOR275C	ERF2	Q06551	359 aa		4.84	□□□□□ -1.63
RIM20	YOR275C	SAS10	Q12136	610 aa	Predicted RBP	4.84	□□□□□ -1.63
RIM20	YOR275C	PBS2	P08018	668 aa		4.84	□□□□□ -1.64
RIM20	YOR275C	MRF1	P30775	413 aa	Predicted RBP	4.83	□□□□□ -1.64
RIM20	YOR275C	AIR1	P40507	360 aa	Known RBP	4.83	□□□□□ -1.64
RIM20	YOR275C	YEL077C	Q3E7X8	1277 aa		4.82	□□□□□ -1.64
RIM20	YOR275C	GCD11	P32481	527 aa	Known RBP	4.82	□□□□□ -1.64
RIM20	YOR275C	LAM6	Q08001	693 aa		4.82	□□□□□ -1.64
RIM20	YOR275C	CKB1	P43639	278 aa		4.8	□□□□□ -1.64
RIM20	YOR275C	KEX2	P13134	814 aa		4.79	□□□□□ -1.64
RIM20	YOR275C	PSE1	P32337	1089 aa	Known RBP	4.79	□□□□□ -1.64
RIM20	YOR275C	NPL4	P33755	580 aa		4.79	□□□□□ -1.64
RIM20	YOR275C	DSF2	P38213	736 aa		4.79	□□□□□ -1.64
RIM20	YOR275C	AGE1	Q04412	482 aa		4.79	□□□□□ -1.64
RIM20	YOR275C	RRN7	P40992	514 aa		4.78	□□□□□ -1.64
RIM20	YOR275C	NUP42	P49686	430 aa	Known RBP	4.78	□□□□□ -1.64
RIM20	YOR275C	ERG12	P07277	443 aa		4.78	□□□□□ -1.64
RIM20	YOR275C	BDP1	P46678	594 aa		4.77	□□□□□ -1.65
RIM20	YOR275C	MOD5	P07884	428 aa		4.76	□□□□□ -1.65
RIM20	YOR275C	PAC1	P39946	494 aa	Known RBP	4.76	□□□□□ -1.65
RIM20	YOR275C	SPT16	P32558	1035 aa	Known RBP	4.76	□□□□□ -1.65
RIM20	YOR275C	MAM3	Q12296	706 aa		4.75	□□□□□ -1.65
RIM20	YOR275C	IES2	P40154	320 aa		4.74	□□□□□ -1.65
RIM20	YOR275C	FRK1	Q03002	865 aa	Predicted RBP	4.74	□□□□□ -1.65
RIM20	YOR275C	SIT4	P20604	311 aa		4.73	□□□□□ -1.65
RIM20	YOR275C	DIT2	P21595	489 aa		4.73	□□□□□ -1.65
RIM20	YOR275C	TUB4	P53378	473 aa		4.73	□□□□□ -1.65
RIM20	YOR275C	NIS1	P53939	407 aa		4.71	□□□□□ -1.66
RIM20	YOR275C	CDC4	P07834	779 aa		4.69	□□□□□ -1.66
RIM20	YOR275C	CLB5	P30283	435 aa		4.69	□□□□□ -1.66
RIM20	YOR275C	BRE2	P43132	505 aa		4.69	□□□□□ -1.66
RIM20	YOR275C	RTF1	P53064	558 aa		4.69	□□□□□ -1.66
RIM20	YOR275C	HED1	Q03937	162 aa		4.69	□□□□□ -1.66
RIM20	YOR275C	YNL115C	P53925	644 aa		4.68	□□□□□ -1.66
RIM20	YOR275C	MET32	Q12041	191 aa		4.68	□□□□□ -1.66
RIM20	YOR275C	TEA1	P47988	759 aa		4.67	□□□□□ -1.66
RIM20	YOR275C	PAT1	P25644	796 aa	Known RBP	4.67	□□□□□ -1.66
RIM20	YOR275C	PUS5	Q06244	254 aa		4.66	□□□□□ -1.66
RIM20	YOR275C	YPL062W	Q02781	134 aa		4.65	□□□□□ -1.66
RIM20	YOR275C	FPK1	P53739	893 aa		4.65	□□□□□ -1.67
RIM20	YOR275C	TPD3	P31383	635 aa		4.64	□□□□□ -1.67
RIM20	YOR275C	MET22	P32179	357 aa		4.63	□□□□□ -1.67
RIM20	YOR275C	SPB4	P25808	606 aa	Predicted RBP	4.62	□□□□□ -1.67
RIM20	YOR275C	PDC1	P06169	563 aa	Known RBP	4.62	□□□□□ -1.67
RIM20	YOR275C	AFT1	P22149	690 aa		4.61	□□□□□ -1.67
RIM20	YOR275C	SCJ1	P25303	377 aa		4.61	□□□□□ -1.67
RIM20	YOR275C	ASH1	P34233	588 aa		4.61	□□□□□ -1.67
RIM20	YOR275C	RRD1	P40454	393 aa	Known RBP	4.61	□□□□□ -1.67
RIM20	YOR275C	HXT10	P43581	546 aa		4.61	□□□□□ -1.67
RIM20	YOR275C	GCR2	Q01722	534 aa		4.61	□□□□□ -1.67
RIM20	YOR275C	SLY41	P22215	453 aa		4.6	□□□□□ -1.67
RIM20	YOR275C	ENV9	Q08651	330 aa		4.59	□□□□□ -1.67
RIM20	YOR275C	YDL176W	Q12027	708 aa		4.58	□□□□□ -1.68
RIM20	YOR275C	GAR1	P28007	205 aa	Known RBP	4.58	□□□□□ -1.68
RIM20	YOR275C	HST2	P53686	357 aa		4.58	□□□□□ -1.68
RIM20	YOR275C	KXD1	P53158	218 aa		4.56	□□□□□ -1.68
RIM20	YOR275C	YPR097W	Q06839	1073 aa		4.56	□□□□□ -1.68
RIM20	YOR275C	YDL206W	Q12424	762 aa		4.56	□□□□□ -1.68
RIM20	YOR275C	TRM1	P15565	570 aa	Known RBP	4.55	□□□□□ -1.68
RIM20	YOR275C	YJR115W	P47152	169 aa		4.55	□□□□□ -1.68
RIM20	YOR275C	RPA14	P50106	137 aa		4.55	□□□□□ -1.68
RIM20	YOR275C	PUS6	P53294	404 aa		4.55	□□□□□ -1.68
RIM20	YOR275C	YDR444W	Q04093	687 aa		4.55	□□□□□ -1.68
RIM20	YOR275C	KTR1	P27810	393 aa	Known RBP	4.54	□□□□□ -1.68
RIM20	YOR275C	LCB5	Q06147	687 aa	Known RBP	4.54	□□□□□ -1.68
RIM20	YOR275C	RSC30	P38781	883 aa		4.54	□□□□□ -1.68
RIM20	YOR275C	RQC2	Q12532	1038 aa	Known RBP	4.54	□□□□□ -1.68
RIM20	YOR275C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
RIM20	YOR275C	MSB3	P48566	633 aa	Predicted RBP	4.53	□□□□□ -1.68
RIM20	YOR275C	SYH1	Q02875	849 aa	Known RBP	4.53	□□□□□ -1.68
RIM20	YOR275C	YMR196W	Q04336	1088 aa		4.53	□□□□□ -1.68
RIM20	YOR275C	ESS1	P22696	170 aa		4.53	□□□□□ -1.68
RIM20	YOR275C	YJU3	P28321	313 aa		4.53	□□□□□ -1.68
RIM20	YOR275C	GLC3	P32775	704 aa		4.53	□□□□□ -1.68
RIM20	YOR275C	HST3	P53687	447 aa		4.53	□□□□□ -1.68
RIM20	YOR275C	YNR021W	P53723	404 aa	Known RBP	4.52	□□□□□ -1.69
RIM20	YOR275C	TYW1	Q08960	810 aa	Known RBP	4.52	□□□□□ -1.69
RIM20	YOR275C	MMP1	Q12372	583 aa		4.52	□□□□□ -1.69
RIM20	YOR275C	MRT4	P33201	236 aa	Known RBP	4.51	□□□□□ -1.69
RIM20	YOR275C	ALR1	Q08269	859 aa		4.51	□□□□□ -1.69
RIM20	YOR275C	GLN1	P32288	370 aa	Known RBP	4.5	□□□□□ -1.69
RIM20	YOR275C	ATF2	P53296	535 aa		4.49	□□□□□ -1.69
RIM20	YOR275C	VAC17	P25591	423 aa		4.48	□□□□□ -1.69
RIM20	YOR275C	TBF1	Q02457	562 aa		4.48	□□□□□ -1.69
RIM20	YOR275C	ITT1	Q04638	464 aa		4.48	□□□□□ -1.69
RIM20	YOR275C	PTK2	P47116	818 aa	Known RBP	4.47	□□□□□ -1.69
RIM20	YOR275C	IXR1	P33417	597 aa		4.46	□□□□□ -1.7
RIM20	YOR275C	OPT2	Q06593	877 aa		4.46	□□□□□ -1.7
RIM20	YOR275C	KIP2	P28743	706 aa		4.45	□□□□□ -1.7
RIM20	YOR275C	ACO2	P39533	789 aa		4.45	□□□□□ -1.7
RIM20	YOR275C	AIM7	Q12156	149 aa		4.45	□□□□□ -1.7
RIM20	YOR275C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
RIM20	YOR275C	UGA3	P26370	528 aa		4.44	□□□□□ -1.7
RIM20	YOR275C	YBL086C	P38177	466 aa		4.44	□□□□□ -1.7
RIM20	YOR275C	PKH3	Q03306	898 aa	Predicted RBP	4.42	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms