RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeastyeast

Gene SME1, Length 285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SME1YOR159C TY1A-DR1Q03856 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-ML1Q04706 440 aaKnown RBP8.32□□□□□ -1.08
SME1YOR159C TY1A-BRQ12217 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-NL2Q12470 440 aa8.32□□□□□ -1.08
SME1YOR159C TY1A-GR2Q12485 440 aa8.32□□□□□ -1.08
SME1YOR159C PRT1P06103 763 aaKnown RBP8.31□□□□□ -1.08
SME1YOR159C DIT2P21595 489 aa8.31□□□□□ -1.08
SME1YOR159C SEC2P17065 759 aa8.3□□□□□ -1.08
SME1YOR159C NPL4P33755 580 aa8.3□□□□□ -1.08
SME1YOR159C GCD11P32481 527 aaKnown RBP8.29□□□□□ -1.08
SME1YOR159C SAS4Q04003 481 aa8.29□□□□□ -1.08
SME1YOR159C ERF2Q06551 359 aa8.28□□□□□ -1.08
SME1YOR159C KEX2P13134 814 aa8.26□□□□□ -1.09
SME1YOR159C SRC1Q03707 834 aa8.24□□□□□ -1.09
SME1YOR159C AMS1P22855 1083 aa8.23□□□□□ -1.09
SME1YOR159C CLB5P30283 435 aa8.19□□□□□ -1.1
SME1YOR159C RRN7P40992 514 aa8.19□□□□□ -1.1
SME1YOR159C TEA1P47988 759 aa8.19□□□□□ -1.1
SME1YOR159C MRF1P30775 413 aaPredicted RBP8.18□□□□□ -1.1
SME1YOR159C NIS1P53939 407 aa8.17□□□□□ -1.1
SME1YOR159C YEL077CQ3E7X8 1277 aa8.17□□□□□ -1.1
SME1YOR159C SPT16P32558 1035 aaKnown RBP8.16□□□□□ -1.1
SME1YOR159C CST6P40535 587 aa8.16□□□□□ -1.1
SME1YOR159C ERG12P07277 443 aa8.14□□□□□ -1.11
SME1YOR159C PAC1P39946 494 aaKnown RBP8.13□□□□□ -1.11
SME1YOR159C SIT4P20604 311 aa8.12□□□□□ -1.11
SME1YOR159C GLC3P32775 704 aa8.12□□□□□ -1.11
SME1YOR159C AGE1Q04412 482 aa8.12□□□□□ -1.11
SME1YOR159C CLA4P48562 842 aa8.1□□□□□ -1.11
SME1YOR159C YNL115CP53925 644 aa8.1□□□□□ -1.11
SME1YOR159C FRK1Q03002 865 aaPredicted RBP8.1□□□□□ -1.11
SME1YOR159C TUB4P53378 473 aa8.09□□□□□ -1.11
SME1YOR159C FPK1P53739 893 aa8.09□□□□□ -1.11
SME1YOR159C LAM6Q08001 693 aa8.09□□□□□ -1.11
SME1YOR159C RTF1P53064 558 aa8.08□□□□□ -1.12
SME1YOR159C YNR021WP53723 404 aaKnown RBP8.08□□□□□ -1.12
SME1YOR159C PAT1P25644 796 aaKnown RBP8.07□□□□□ -1.12
SME1YOR159C BDP1P46678 594 aa8.07□□□□□ -1.12
SME1YOR159C ATF2P53296 535 aa8.07□□□□□ -1.12
SME1YOR159C YMR196WQ04336 1088 aa8.06□□□□□ -1.12
SME1YOR159C SCJ1P25303 377 aa8.05□□□□□ -1.12
SME1YOR159C AIR1P40507 360 aaKnown RBP8.05□□□□□ -1.12
SME1YOR159C SLY41P22215 453 aa8.04□□□□□ -1.12
SME1YOR159C TRK1P12685 1235 aa8.02□□□□□ -1.13
SME1YOR159C MOD5P07884 428 aa8□□□□□ -1.13
SME1YOR159C HST2P53686 357 aa7.98□□□□□ -1.13
SME1YOR159C PUS5Q06244 254 aa7.98□□□□□ -1.13
SME1YOR159C TYW1Q08960 810 aaKnown RBP7.98□□□□□ -1.13
SME1YOR159C ESS1P22696 170 aa7.97□□□□□ -1.13
SME1YOR159C MMP1Q12372 583 aa7.96□□□□□ -1.14
SME1YOR159C AIM7Q12156 149 aa7.94□□□□□ -1.14
SME1YOR159C PDC1P06169 563 aaKnown RBP7.93□□□□□ -1.14
SME1YOR159C TRM1P15565 570 aaKnown RBP7.93□□□□□ -1.14
SME1YOR159C KTR1P27810 393 aaKnown RBP7.93□□□□□ -1.14
SME1YOR159C YJU3P28321 313 aa7.93□□□□□ -1.14
SME1YOR159C GLN1P32288 370 aaKnown RBP7.93□□□□□ -1.14
SME1YOR159C KXD1P53158 218 aa7.92□□□□□ -1.14
SME1YOR159C YDL206WQ12424 762 aa7.92□□□□□ -1.14
SME1YOR159C LEU3P08638 886 aa7.91□□□□□ -1.14
SME1YOR159C PUS6P53294 404 aa7.91□□□□□ -1.14
SME1YOR159C TBF1Q02457 562 aa7.9□□□□□ -1.14
SME1YOR159C HED1Q03937 162 aa7.9□□□□□ -1.14
SME1YOR159C HXT10P43581 546 aa7.89□□□□□ -1.15
SME1YOR159C CDC4P07834 779 aa7.88□□□□□ -1.15
SME1YOR159C RRD1P40454 393 aaKnown RBP7.88□□□□□ -1.15
SME1YOR159C MET32Q12041 191 aa7.87□□□□□ -1.15
SME1YOR159C KIN1P13185 1064 aa7.86□□□□□ -1.15
SME1YOR159C TPD3P31383 635 aa7.86□□□□□ -1.15
SME1YOR159C CSN12P47130 423 aa7.86□□□□□ -1.15
SME1YOR159C RPA14P50106 137 aa7.86□□□□□ -1.15
SME1YOR159C PKH3Q03306 898 aaPredicted RBP7.86□□□□□ -1.15
SME1YOR159C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
SME1YOR159C BRE2P43132 505 aa7.84□□□□□ -1.15
SME1YOR159C ALR1Q08269 859 aa7.84□□□□□ -1.15
SME1YOR159C YPR097WQ06839 1073 aa7.83□□□□□ -1.16
SME1YOR159C RSC30P38781 883 aa7.82□□□□□ -1.16
SME1YOR159C ARG8P18544 423 aa7.79□□□□□ -1.16
SME1YOR159C ASH1P34233 588 aa7.79□□□□□ -1.16
SME1YOR159C SYH1Q02875 849 aaKnown RBP7.78□□□□□ -1.16
SME1YOR159C RPN1P38764 993 aaKnown RBP7.77□□□□□ -1.17
SME1YOR159C KIP2P28743 706 aa7.76□□□□□ -1.17
SME1YOR159C RAD59Q12223 238 aa7.76□□□□□ -1.17
SME1YOR159C AFT1P22149 690 aa7.75□□□□□ -1.17
SME1YOR159C GCR2Q01722 534 aa7.75□□□□□ -1.17
SME1YOR159C ITT1Q04638 464 aa7.75□□□□□ -1.17
SME1YOR159C IXR1P33417 597 aa7.74□□□□□ -1.17
SME1YOR159C HST3P53687 447 aa7.74□□□□□ -1.17
SME1YOR159C GUA1P38625 525 aaKnown RBP7.73□□□□□ -1.17
SME1YOR159C VAC17P25591 423 aa7.7□□□□□ -1.18
SME1YOR159C YJR115WP47152 169 aa7.69□□□□□ -1.18
SME1YOR159C SSA2P10592 639 aaKnown RBP7.68□□□□□ -1.18
SME1YOR159C GAR1P28007 205 aaKnown RBP7.67□□□□□ -1.18
SME1YOR159C MET22P32179 357 aa7.67□□□□□ -1.18
SME1YOR159C FIG4P42837 879 aa7.66□□□□□ -1.18
SME1YOR159C MRT4P33201 236 aaKnown RBP7.65□□□□□ -1.18
SME1YOR159C MSB3P48566 633 aaPredicted RBP7.64□□□□□ -1.19
SME1YOR159C APP1P53933 587 aa7.64□□□□□ -1.19
SME1YOR159C UGA3P26370 528 aa7.63□□□□□ -1.19
SME1YOR159C MAK16P10962 306 aaPredicted RBP7.61□□□□□ -1.19
SME1YOR159C ENV9Q08651 330 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms