RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W TY1B-ER1Q03612 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-ML1Q04711 1755 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W TY1B-GR2Q12269 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-OLQ12273 1755 aa4.07□□□□□ -1.76
PHD1YKL043W TY1B-PLQ12414 1755 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W TRM732Q03496 1420 aa4.07□□□□□ -1.76
PHD1YKL043W IKI3Q06706 1349 aaKnown RBP4.07□□□□□ -1.76
PHD1YKL043W YTA7P40340 1379 aa4.06□□□□□ -1.76
PHD1YKL043W VRP1P37370 817 aa4.06□□□□□ -1.76
PHD1YKL043W MPH3P0CE00 602 aa4.05□□□□□ -1.76
PHD1YKL043W RPA190P10964 1664 aaKnown RBP4.05□□□□□ -1.76
PHD1YKL043W TSC11P40061 1430 aa4.04□□□□□ -1.76
PHD1YKL043W MET5P47169 1442 aa4.04□□□□□ -1.76
PHD1YKL043W AI4P03878 556 aa4.04□□□□□ -1.76
PHD1YKL043W PEX29Q03370 554 aa4.04□□□□□ -1.76
PHD1YKL043W SAS10Q12136 610 aaPredicted RBP4.04□□□□□ -1.76
PHD1YKL043W VTH1P40438 1549 aa4.04□□□□□ -1.76
PHD1YKL043W VTH2P40890 1549 aa4.04□□□□□ -1.76
PHD1YKL043W MYO4P32492 1471 aa4.04□□□□□ -1.76
PHD1YKL043W SIS2P36024 562 aa4.03□□□□□ -1.76
PHD1YKL043W ARH1P48360 493 aa4.03□□□□□ -1.76
PHD1YKL043W YGR273CP53329 174 aa4.03□□□□□ -1.76
PHD1YKL043W POL5P39985 1022 aaKnown RBP4.02□□□□□ -1.77
PHD1YKL043W TCB2P48231 1178 aa4.02□□□□□ -1.77
PHD1YKL043W URN1Q06525 465 aaKnown RBP4.02□□□□□ -1.77
PHD1YKL043W NUP159P40477 1460 aa4.02□□□□□ -1.77
PHD1YKL043W MPC54Q08550 464 aa4.01□□□□□ -1.77
PHD1YKL043W TY1B-JR2P47100 1755 aaKnown RBP4□□□□□ -1.77
PHD1YKL043W TY1B-ER2Q03619 1755 aa4□□□□□ -1.77
PHD1YKL043W TY1B-MR1Q04214 1755 aa4□□□□□ -1.77
PHD1YKL043W TY1B-MR2Q04670 1755 aaKnown RBP4□□□□□ -1.77
PHD1YKL043W TY1B-LR1Q12088 1755 aaKnown RBP4□□□□□ -1.77
PHD1YKL043W TY1B-NL1Q12112 1755 aa4□□□□□ -1.77
PHD1YKL043W TY1B-GR1Q12141 1755 aa4□□□□□ -1.77
PHD1YKL043W TY1B-BLQ12490 1755 aa4□□□□□ -1.77
PHD1YKL043W NTE1Q04958 1679 aa4□□□□□ -1.77
PHD1YKL043W LTE1P07866 1435 aa3.99□□□□□ -1.77
PHD1YKL043W SLI15P38283 698 aa3.99□□□□□ -1.77
PHD1YKL043W XDJ1P39102 459 aa3.99□□□□□ -1.77
PHD1YKL043W HAP5Q02516 242 aa3.99□□□□□ -1.77
PHD1YKL043W YPR148CQ06523 435 aa3.99□□□□□ -1.77
PHD1YKL043W SNQ2P32568 1501 aaKnown RBP3.99□□□□□ -1.77
PHD1YKL043W VPS15P22219 1454 aa3.98□□□□□ -1.77
PHD1YKL043W MLP2P40457 1679 aa3.98□□□□□ -1.77
PHD1YKL043W SPT23P35210 1082 aa3.98□□□□□ -1.77
PHD1YKL043W MNN4P36044 1178 aa3.98□□□□□ -1.77
PHD1YKL043W RTT106P40161 455 aa3.98□□□□□ -1.77
PHD1YKL043W RPO21P04050 1733 aaKnown RBP3.98□□□□□ -1.77
PHD1YKL043W GEA2P39993 1459 aaKnown RBP3.98□□□□□ -1.77
PHD1YKL043W YRF1-1P0CX20 1796 aa3.97□□□□□ -1.77
PHD1YKL043W YRF1-5P0CX21 1796 aa3.97□□□□□ -1.77
PHD1YKL043W YRF1-8P0CX22 1796 aa3.97□□□□□ -1.77
PHD1YKL043W SNT2P53127 1403 aa3.96□□□□□ -1.77
PHD1YKL043W DPS1P04802 557 aaKnown RBP3.96□□□□□ -1.78
PHD1YKL043W PRS1P32895 427 aaKnown RBP3.96□□□□□ -1.78
PHD1YKL043W IFH1P39520 1085 aa3.96□□□□□ -1.78
PHD1YKL043W YPR015CQ12531 247 aa3.96□□□□□ -1.78
PHD1YKL043W PDR15Q04182 1529 aaKnown RBP3.95□□□□□ -1.78
PHD1YKL043W IRC20Q06554 1556 aa3.95□□□□□ -1.78
PHD1YKL043W QCR6P00127 147 aa3.95□□□□□ -1.78
PHD1YKL043W KEX1P09620 729 aa3.95□□□□□ -1.78
PHD1YKL043W SET1P38827 1080 aaKnown RBP3.95□□□□□ -1.78
PHD1YKL043W MET10P39692 1035 aa3.95□□□□□ -1.78
PHD1YKL043W BNI4P53858 892 aa3.95□□□□□ -1.78
PHD1YKL043W NMA111P53920 997 aa3.95□□□□□ -1.78
PHD1YKL043W ITT1Q04638 464 aa3.95□□□□□ -1.78
PHD1YKL043W TAF7Q05021 590 aa3.95□□□□□ -1.78
PHD1YKL043W DRS2P39524 1355 aa3.94□□□□□ -1.78
PHD1YKL043W CLC1P17891 233 aa3.94□□□□□ -1.78
PHD1YKL043W PTC2P39966 464 aaKnown RBP3.94□□□□□ -1.78
PHD1YKL043W VHR2P40041 505 aa3.94□□□□□ -1.78
PHD1YKL043W NOP53Q12080 455 aaKnown RBP3.94□□□□□ -1.78
PHD1YKL043W ULS1Q08562 1619 aa3.94□□□□□ -1.78
PHD1YKL043W YLR419WQ06698 1435 aaKnown RBP3.94□□□□□ -1.78
PHD1YKL043W DPL1Q05567 589 aa3.93□□□□□ -1.78
PHD1YKL043W YLR326WQ06170 240 aaKnown RBP3.93□□□□□ -1.78
PHD1YKL043W CDC73Q06697 393 aa3.93□□□□□ -1.78
PHD1YKL043W RLF2Q12495 606 aa3.93□□□□□ -1.78
PHD1YKL043W SRB8P25648 1427 aa3.93□□□□□ -1.78
PHD1YKL043W IME2P32581 645 aa3.92□□□□□ -1.78
PHD1YKL043W SRC1Q03707 834 aa3.92□□□□□ -1.78
PHD1YKL043W SPT7P35177 1332 aa3.92□□□□□ -1.78
PHD1YKL043W SPO14P36126 1683 aa3.91□□□□□ -1.78
PHD1YKL043W BNI1P41832 1953 aa3.91□□□□□ -1.78
PHD1YKL043W RAM1P22007 431 aa3.91□□□□□ -1.78
PHD1YKL043W YML082WQ04533 649 aaKnown RBP3.91□□□□□ -1.78
PHD1YKL043W MMS1Q06211 1407 aa3.91□□□□□ -1.78
PHD1YKL043W NUP157P40064 1391 aaKnown RBP3.9□□□□□ -1.78
PHD1YKL043W PDR10P51533 1564 aa3.9□□□□□ -1.78
PHD1YKL043W GEA1P47102 1408 aaPredicted RBP3.9□□□□□ -1.78
PHD1YKL043W PDR1P12383 1068 aa3.9□□□□□ -1.79
PHD1YKL043W PCS60P38137 543 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
PHD1YKL043W UBP14P38237 781 aaKnown RBP3.9□□□□□ -1.79
PHD1YKL043W SSM4P40318 1319 aa3.9□□□□□ -1.79
PHD1YKL043W PDR12Q02785 1511 aa3.9□□□□□ -1.79
PHD1YKL043W GDB1Q06625 1536 aa3.89□□□□□ -1.79
PHD1YKL043W IQG1Q12280 1495 aa3.88□□□□□ -1.79
PHD1YKL043W RAS1P01119 309 aa3.88□□□□□ -1.79
PHD1YKL043W PDR5P33302 1511 aaKnown RBP3.87□□□□□ -1.79
PHD1YKL043W TY3B-GQ99315 1547 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms