RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C ULI1P43604 169 aa6.23□□□□□ -1.41
OTU1YFL044C MLP2P40457 1679 aa6.23□□□□□ -1.41
OTU1YFL044C IFH1P39520 1085 aa6.22□□□□□ -1.41
OTU1YFL044C STH1P32597 1359 aa6.21□□□□□ -1.41
OTU1YFL044C COQ8P27697 501 aa6.21□□□□□ -1.42
OTU1YFL044C TRM3Q07527 1436 aa6.21□□□□□ -1.42
OTU1YFL044C YOL036WQ08206 761 aa6.2□□□□□ -1.42
OTU1YFL044C LDB19Q12502 818 aa6.19□□□□□ -1.42
OTU1YFL044C GDB1Q06625 1536 aa6.18□□□□□ -1.42
OTU1YFL044C BUD3P25558 1636 aa6.17□□□□□ -1.42
OTU1YFL044C VPS70P47161 811 aa6.17□□□□□ -1.42
OTU1YFL044C YPR148CQ06523 435 aa6.17□□□□□ -1.42
OTU1YFL044C NOP53Q12080 455 aaKnown RBP6.17□□□□□ -1.42
OTU1YFL044C IQG1Q12280 1495 aa6.16□□□□□ -1.42
OTU1YFL044C PDR10P51533 1564 aa6.16□□□□□ -1.42
OTU1YFL044C LEU3P08638 886 aa6.16□□□□□ -1.42
OTU1YFL044C TRP5P00931 707 aaKnown RBP6.15□□□□□ -1.42
OTU1YFL044C CKB1P43639 278 aa6.15□□□□□ -1.42
OTU1YFL044C DCW1P36091 449 aa6.14□□□□□ -1.43
OTU1YFL044C IOC2Q12072 812 aa6.14□□□□□ -1.43
OTU1YFL044C GYP5Q12344 894 aa6.14□□□□□ -1.43
OTU1YFL044C SEC7P11075 2009 aaKnown RBP6.13□□□□□ -1.43
OTU1YFL044C EDS1P38073 919 aa6.13□□□□□ -1.43
OTU1YFL044C PDR15Q04182 1529 aaKnown RBP6.13□□□□□ -1.43
OTU1YFL044C CHC1P22137 1653 aaKnown RBP6.13□□□□□ -1.43
OTU1YFL044C YJL171CP46992 396 aa6.12□□□□□ -1.43
OTU1YFL044C DNF3Q12674 1656 aa6.12□□□□□ -1.43
OTU1YFL044C ARO1P08566 1588 aaKnown RBP6.11□□□□□ -1.43
OTU1YFL044C EAP1P36041 632 aaKnown RBP6.11□□□□□ -1.43
OTU1YFL044C RTT106P40161 455 aa6.11□□□□□ -1.43
OTU1YFL044C MSB4Q12317 492 aa6.11□□□□□ -1.43
OTU1YFL044C NUP157P40064 1391 aaKnown RBP6.1□□□□□ -1.43
OTU1YFL044C SPB4P25808 606 aaPredicted RBP6.1□□□□□ -1.43
OTU1YFL044C PTC3P34221 468 aaKnown RBP6.1□□□□□ -1.43
OTU1YFL044C AIR2Q12476 344 aaKnown RBP6.1□□□□□ -1.43
OTU1YFL044C RTG1P32607 177 aa6.09□□□□□ -1.43
OTU1YFL044C SAM3Q08986 587 aa6.09□□□□□ -1.43
OTU1YFL044C FKH1P40466 484 aa6.07□□□□□ -1.44
OTU1YFL044C USO1P25386 1790 aa6.07□□□□□ -1.44
OTU1YFL044C GRE2Q12068 342 aaKnown RBP6.06□□□□□ -1.44
OTU1YFL044C NCR1Q12200 1170 aa6.05□□□□□ -1.44
OTU1YFL044C HTA1P04911 132 aaKnown RBP6.04□□□□□ -1.44
OTU1YFL044C HTA2P04912 132 aa6.04□□□□□ -1.44
OTU1YFL044C ATH1P48016 1211 aa6.04□□□□□ -1.44
OTU1YFL044C REF2P42073 533 aaPredicted RBP6.03□□□□□ -1.44
OTU1YFL044C PBS2P08018 668 aa6.02□□□□□ -1.45
OTU1YFL044C GUT1P32190 709 aa6.02□□□□□ -1.45
OTU1YFL044C YEL023CP39992 682 aa6.02□□□□□ -1.45
OTU1YFL044C YNL035CP53962 389 aaKnown RBP6.02□□□□□ -1.45
OTU1YFL044C BMT6Q12291 365 aa6.01□□□□□ -1.45
OTU1YFL044C RPN1P38764 993 aaKnown RBP6□□□□□ -1.45
OTU1YFL044C TFG1P41895 735 aaPredicted RBP6□□□□□ -1.45
OTU1YFL044C CAT8P39113 1433 aa5.99□□□□□ -1.45
OTU1YFL044C TY3B-GQ99315 1547 aa5.99□□□□□ -1.45
OTU1YFL044C YBT1P32386 1661 aa5.99□□□□□ -1.45
OTU1YFL044C DSF2P38213 736 aa5.99□□□□□ -1.45
OTU1YFL044C GLN1P32288 370 aaKnown RBP5.97□□□□□ -1.45
OTU1YFL044C PTC4P38089 393 aa5.97□□□□□ -1.45
OTU1YFL044C SAP30P38429 201 aa5.97□□□□□ -1.45
OTU1YFL044C YAP3P38749 330 aa5.97□□□□□ -1.45
OTU1YFL044C DAN4P47179 1161 aa5.96□□□□□ -1.46
OTU1YFL044C MAK10Q02197 733 aa5.96□□□□□ -1.46
OTU1YFL044C MAK21Q12176 1025 aaKnown RBP5.96□□□□□ -1.46
OTU1YFL044C MAM3Q12296 706 aa5.96□□□□□ -1.46
OTU1YFL044C SEC61P32915 480 aa5.95□□□□□ -1.46
OTU1YFL044C JIP4Q03361 876 aa5.95□□□□□ -1.46
OTU1YFL044C YSP2Q06681 1438 aa5.94□□□□□ -1.46
OTU1YFL044C VHR2P40041 505 aa5.94□□□□□ -1.46
OTU1YFL044C COX6P00427 148 aa5.93□□□□□ -1.46
OTU1YFL044C YGR273CP53329 174 aa5.93□□□□□ -1.46
OTU1YFL044C PML39Q03760 334 aa5.93□□□□□ -1.46
OTU1YFL044C HAP1P0CE41 1502 aa5.93□□□□□ -1.46
OTU1YFL044C GEA1P47102 1408 aaPredicted RBP5.92□□□□□ -1.46
OTU1YFL044C SOL3P38858 249 aa5.91□□□□□ -1.46
OTU1YFL044C BNR1P40450 1375 aa5.91□□□□□ -1.46
OTU1YFL044C UBP14P38237 781 aaKnown RBP5.9□□□□□ -1.46
OTU1YFL044C KIC1P38692 1080 aa5.9□□□□□ -1.46
OTU1YFL044C IES2P40154 320 aa5.9□□□□□ -1.46
OTU1YFL044C MID1P41821 548 aa5.9□□□□□ -1.46
OTU1YFL044C YLR326WQ06170 240 aaKnown RBP5.9□□□□□ -1.46
OTU1YFL044C TY1B-NL2Q99337 1749 aaKnown RBP5.89□□□□□ -1.47
OTU1YFL044C YNR021WP53723 404 aaKnown RBP5.89□□□□□ -1.47
OTU1YFL044C URN1Q06525 465 aaKnown RBP5.89□□□□□ -1.47
OTU1YFL044C KEX1P09620 729 aa5.88□□□□□ -1.47
OTU1YFL044C YDR090CQ03193 310 aa5.88□□□□□ -1.47
OTU1YFL044C YDL129WQ07555 291 aa5.88□□□□□ -1.47
OTU1YFL044C RAD54P32863 898 aa5.87□□□□□ -1.47
OTU1YFL044C THI12P42883 340 aa5.87□□□□□ -1.47
OTU1YFL044C THI5P43534 340 aa5.87□□□□□ -1.47
OTU1YFL044C THI11P47183 340 aa5.87□□□□□ -1.47
OTU1YFL044C DMA2P53924 522 aa5.87□□□□□ -1.47
OTU1YFL044C THI13Q07748 340 aa5.87□□□□□ -1.47
OTU1YFL044C NST1P53935 1240 aa5.86□□□□□ -1.47
OTU1YFL044C YDR344CQ05510 147 aa5.86□□□□□ -1.47
OTU1YFL044C AI4P03878 556 aa5.85□□□□□ -1.47
OTU1YFL044C MPH3P0CE00 602 aa5.85□□□□□ -1.47
OTU1YFL044C NUP42P49686 430 aaKnown RBP5.85□□□□□ -1.47
OTU1YFL044C DIT2P21595 489 aa5.84□□□□□ -1.47
OTU1YFL044C GLC3P32775 704 aa5.84□□□□□ -1.47
OTU1YFL044C PCS60P38137 543 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms