RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	MAK21	Q12176	1025 aa	Known RBP	6.46	□□□□□ -1.37
RVB1	YDR190C	NUP159	P40477	1460 aa		6.46	□□□□□ -1.38
RVB1	YDR190C	PTC3	P34221	468 aa	Known RBP	6.45	□□□□□ -1.38
RVB1	YDR190C	BUD3	P25558	1636 aa		6.45	□□□□□ -1.38
RVB1	YDR190C	AIM7	Q12156	149 aa		6.44	□□□□□ -1.38
RVB1	YDR190C	SRB8	P25648	1427 aa		6.44	□□□□□ -1.38
RVB1	YDR190C	TIF4632	P39936	914 aa	Known RBP	6.44	□□□□□ -1.38
RVB1	YDR190C	IES2	P40154	320 aa		6.44	□□□□□ -1.38
RVB1	YDR190C	BUD21	Q08492	214 aa	Predicted RBP	6.44	□□□□□ -1.38
RVB1	YDR190C	RLF2	Q12495	606 aa		6.44	□□□□□ -1.38
RVB1	YDR190C	YRF1-1	P0CX20	1796 aa		6.43	□□□□□ -1.38
RVB1	YDR190C	YRF1-5	P0CX21	1796 aa		6.43	□□□□□ -1.38
RVB1	YDR190C	YRF1-8	P0CX22	1796 aa		6.43	□□□□□ -1.38
RVB1	YDR190C	SPO14	P36126	1683 aa		6.43	□□□□□ -1.38
RVB1	YDR190C	COX6	P00427	148 aa		6.43	□□□□□ -1.38
RVB1	YDR190C	ARO1	P08566	1588 aa	Known RBP	6.43	□□□□□ -1.38
RVB1	YDR190C	NUP157	P40064	1391 aa	Known RBP	6.42	□□□□□ -1.38
RVB1	YDR190C	PDR10	P51533	1564 aa		6.42	□□□□□ -1.38
RVB1	YDR190C	GLC3	P32775	704 aa		6.42	□□□□□ -1.38
RVB1	YDR190C	NUP42	P49686	430 aa	Known RBP	6.42	□□□□□ -1.38
RVB1	YDR190C	DIT2	P21595	489 aa		6.41	□□□□□ -1.38
RVB1	YDR190C	ORC1	P54784	914 aa	Predicted RBP	6.41	□□□□□ -1.38
RVB1	YDR190C	YAP5	P40574	245 aa		6.4	□□□□□ -1.39
RVB1	YDR190C	HGH1	P48362	394 aa	Known RBP	6.4	□□□□□ -1.39
RVB1	YDR190C	TGL3	P40308	642 aa		6.38	□□□□□ -1.39
RVB1	YDR190C	PDR12	Q02785	1511 aa		6.37	□□□□□ -1.39
RVB1	YDR190C	SPT7	P35177	1332 aa		6.37	□□□□□ -1.39
RVB1	YDR190C	YSP2	Q06681	1438 aa		6.36	□□□□□ -1.39
RVB1	YDR190C	ABP1	P15891	592 aa	Known RBP	6.36	□□□□□ -1.39
RVB1	YDR190C	NOP7	P53261	605 aa	Known RBP	6.36	□□□□□ -1.39
RVB1	YDR190C	ATF2	P53296	535 aa		6.36	□□□□□ -1.39
RVB1	YDR190C	GCN2	P15442	1659 aa		6.36	□□□□□ -1.39
RVB1	YDR190C	VMA1	P17255	1071 aa	Known RBP	6.35	□□□□□ -1.39
RVB1	YDR190C	ENP1	P38333	483 aa	Known RBP	6.35	□□□□□ -1.39
RVB1	YDR190C	NOP2	P40991	618 aa	Known RBP	6.35	□□□□□ -1.39
RVB1	YDR190C	PIB1	Q06651	286 aa		6.34	□□□□□ -1.39
RVB1	YDR190C	GUT1	P32190	709 aa		6.33	□□□□□ -1.4
RVB1	YDR190C	UBP14	P38237	781 aa	Known RBP	6.33	□□□□□ -1.4
RVB1	YDR190C	ATH1	P48016	1211 aa		6.33	□□□□□ -1.4
RVB1	YDR190C	GUA1	P38625	525 aa	Known RBP	6.32	□□□□□ -1.4
RVB1	YDR190C	VHR2	P40041	505 aa		6.32	□□□□□ -1.4
RVB1	YDR190C	YDR090C	Q03193	310 aa		6.32	□□□□□ -1.4
RVB1	YDR190C	GRE2	Q12068	342 aa	Known RBP	6.32	□□□□□ -1.4
RVB1	YDR190C	MET5	P47169	1442 aa		6.32	□□□□□ -1.4
RVB1	YDR190C	PAF1	P38351	445 aa		6.31	□□□□□ -1.4
RVB1	YDR190C	MMS1	Q06211	1407 aa		6.31	□□□□□ -1.4
RVB1	YDR190C	IQG1	Q12280	1495 aa		6.31	□□□□□ -1.4
RVB1	YDR190C	SAM3	Q08986	587 aa		6.31	□□□□□ -1.4
RVB1	YDR190C	BNR1	P40450	1375 aa		6.3	□□□□□ -1.4
RVB1	YDR190C	YLR326W	Q06170	240 aa	Known RBP	6.3	□□□□□ -1.4
RVB1	YDR190C	SEC7	P11075	2009 aa	Known RBP	6.29	□□□□□ -1.4
RVB1	YDR190C	KIC1	P38692	1080 aa		6.29	□□□□□ -1.4
RVB1	YDR190C	HPC2	Q01448	625 aa		6.29	□□□□□ -1.4
RVB1	YDR190C	SEC3	P33332	1336 aa	Known RBP	6.28	□□□□□ -1.4
RVB1	YDR190C	YGR273C	P53329	174 aa		6.28	□□□□□ -1.4
RVB1	YDR190C	RAD54	P32863	898 aa		6.26	□□□□□ -1.41
RVB1	YDR190C	TAF5	P38129	798 aa		6.26	□□□□□ -1.41
RVB1	YDR190C	MST1	P07236	462 aa		6.25	□□□□□ -1.41
RVB1	YDR190C	PSE1	P32337	1089 aa	Known RBP	6.25	□□□□□ -1.41
RVB1	YDR190C	GYP5	Q12344	894 aa		6.25	□□□□□ -1.41
RVB1	YDR190C	LTE1	P07866	1435 aa		6.25	□□□□□ -1.41
RVB1	YDR190C	KEX1	P09620	729 aa		6.24	□□□□□ -1.41
RVB1	YDR190C	PDR11	P40550	1411 aa		6.24	□□□□□ -1.41
RVB1	YDR190C	YOR093C	Q12275	1648 aa		6.24	□□□□□ -1.41
RVB1	YDR190C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
RVB1	YDR190C	SOL3	P38858	249 aa		6.22	□□□□□ -1.41
RVB1	YDR190C	SSA2	P10592	639 aa	Known RBP	6.21	□□□□□ -1.41
RVB1	YDR190C	PRS1	P32895	427 aa	Known RBP	6.21	□□□□□ -1.41
RVB1	YDR190C	GTT3	P39996	337 aa		6.21	□□□□□ -1.41
RVB1	YDR190C	RTC1	Q08281	1341 aa		6.21	□□□□□ -1.42
RVB1	YDR190C	MHP1	P43638	1398 aa		6.21	□□□□□ -1.42
RVB1	YDR190C	CHC1	P22137	1653 aa	Known RBP	6.2	□□□□□ -1.42
RVB1	YDR190C	BRL1	P38770	471 aa		6.2	□□□□□ -1.42
RVB1	YDR190C	KIP3	P53086	805 aa	Known RBP	6.2	□□□□□ -1.42
RVB1	YDR190C	NST1	P53935	1240 aa		6.2	□□□□□ -1.42
RVB1	YDR190C	TFB3	Q03290	321 aa		6.2	□□□□□ -1.42
RVB1	YDR190C	PDS5	Q04264	1277 aa		6.2	□□□□□ -1.42
RVB1	YDR190C	PDR5	P33302	1511 aa	Known RBP	6.2	□□□□□ -1.42
RVB1	YDR190C	DRS2	P39524	1355 aa		6.2	□□□□□ -1.42
RVB1	YDR190C	RAV1	P47104	1357 aa		6.19	□□□□□ -1.42
RVB1	YDR190C	CSN12	P47130	423 aa		6.18	□□□□□ -1.42
RVB1	YDR190C	VMR1	P38735	1592 aa		6.18	□□□□□ -1.42
RVB1	YDR190C	DCW1	P36091	449 aa		6.18	□□□□□ -1.42
RVB1	YDR190C	ESL2	P36168	1195 aa		6.18	□□□□□ -1.42
RVB1	YDR190C	ORC6	P38826	435 aa		6.18	□□□□□ -1.42
RVB1	YDR190C	TY3B-I	Q7LHG5	1498 aa	Known RBP	6.17	□□□□□ -1.42
RVB1	YDR190C	TYS1	P36421	394 aa	Known RBP	6.17	□□□□□ -1.42
RVB1	YDR190C	TEA1	P47988	759 aa		6.17	□□□□□ -1.42
RVB1	YDR190C	YOL036W	Q08206	761 aa		6.17	□□□□□ -1.42
RVB1	YDR190C	DOP1	Q03921	1698 aa		6.15	□□□□□ -1.42
RVB1	YDR190C	AI4	P03878	556 aa		6.15	□□□□□ -1.43
RVB1	YDR190C	HTA1	P04911	132 aa	Known RBP	6.15	□□□□□ -1.43
RVB1	YDR190C	HTA2	P04912	132 aa		6.15	□□□□□ -1.43
RVB1	YDR190C	NUP188	P52593	1655 aa	Known RBP	6.15	□□□□□ -1.43
RVB1	YDR190C	ITT1	Q04638	464 aa		6.15	□□□□□ -1.43
RVB1	YDR190C	NUP192	P47054	1683 aa		6.14	□□□□□ -1.43
RVB1	YDR190C	MPH3	P0CE00	602 aa		6.14	□□□□□ -1.43
RVB1	YDR190C	PKC1	P24583	1151 aa		6.14	□□□□□ -1.43
RVB1	YDR190C	IML1	P47170	1584 aa		6.13	□□□□□ -1.43
RVB1	YDR190C	YLR419W	Q06698	1435 aa	Known RBP	6.13	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms