RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W TY1A-MR2P0CX69 440 aa4.86□□□□□ -1.63
SWD3YBR175W SEC2P17065 759 aa4.86□□□□□ -1.63
SWD3YBR175W MVP1P40959 511 aaKnown RBP4.86□□□□□ -1.63
SWD3YBR175W TY1A-JR2P47099 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-DR1Q03856 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-ML1Q04706 440 aaKnown RBP4.86□□□□□ -1.63
SWD3YBR175W TY1A-BRQ12217 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-NL2Q12470 440 aa4.86□□□□□ -1.63
SWD3YBR175W TY1A-GR2Q12485 440 aa4.86□□□□□ -1.63
SWD3YBR175W ERG12P07277 443 aa4.85□□□□□ -1.63
SWD3YBR175W NPL4P33755 580 aa4.85□□□□□ -1.63
SWD3YBR175W RGR1P19263 1082 aa4.84□□□□□ -1.63
SWD3YBR175W GCD11P32481 527 aaKnown RBP4.84□□□□□ -1.63
SWD3YBR175W CST6P40535 587 aa4.84□□□□□ -1.63
SWD3YBR175W DMA2P53924 522 aa4.83□□□□□ -1.64
SWD3YBR175W YPR109WQ06104 294 aa4.83□□□□□ -1.64
SWD3YBR175W LAM6Q08001 693 aa4.83□□□□□ -1.64
SWD3YBR175W AIR1P40507 360 aaKnown RBP4.82□□□□□ -1.64
SWD3YBR175W PBS2P08018 668 aa4.81□□□□□ -1.64
SWD3YBR175W SPT16P32558 1035 aaKnown RBP4.81□□□□□ -1.64
SWD3YBR175W DSF2P38213 736 aa4.81□□□□□ -1.64
SWD3YBR175W CLA4P48562 842 aa4.81□□□□□ -1.64
SWD3YBR175W RPN1P38764 993 aaKnown RBP4.79□□□□□ -1.64
SWD3YBR175W BRE2P43132 505 aa4.79□□□□□ -1.64
SWD3YBR175W YPL062WQ02781 134 aa4.79□□□□□ -1.64
SWD3YBR175W SPB4P25808 606 aaPredicted RBP4.77□□□□□ -1.65
SWD3YBR175W RRN7P40992 514 aa4.77□□□□□ -1.65
SWD3YBR175W GCR2Q01722 534 aa4.77□□□□□ -1.65
SWD3YBR175W CDC4P07834 779 aa4.76□□□□□ -1.65
SWD3YBR175W BDP1P46678 594 aa4.76□□□□□ -1.65
SWD3YBR175W FRK1Q03002 865 aaPredicted RBP4.76□□□□□ -1.65
SWD3YBR175W ERF2Q06551 359 aa4.76□□□□□ -1.65
SWD3YBR175W MAM3Q12296 706 aa4.76□□□□□ -1.65
SWD3YBR175W PAT1P25644 796 aaKnown RBP4.75□□□□□ -1.65
SWD3YBR175W KEX2P13134 814 aa4.74□□□□□ -1.65
SWD3YBR175W HED1Q03937 162 aa4.74□□□□□ -1.65
SWD3YBR175W PSE1P32337 1089 aaKnown RBP4.73□□□□□ -1.65
SWD3YBR175W MOD5P07884 428 aa4.72□□□□□ -1.65
SWD3YBR175W RLF2Q12495 606 aa4.72□□□□□ -1.65
SWD3YBR175W GAR1P28007 205 aaKnown RBP4.7□□□□□ -1.66
SWD3YBR175W PAC1P39946 494 aaKnown RBP4.7□□□□□ -1.66
SWD3YBR175W IES2P40154 320 aa4.7□□□□□ -1.66
SWD3YBR175W NUP42P49686 430 aaKnown RBP4.7□□□□□ -1.66
SWD3YBR175W AGE1Q04412 482 aa4.7□□□□□ -1.66
SWD3YBR175W CLB5P30283 435 aa4.69□□□□□ -1.66
SWD3YBR175W MET22P32179 357 aa4.69□□□□□ -1.66
SWD3YBR175W TUB4P53378 473 aa4.68□□□□□ -1.66
SWD3YBR175W RTF1P53064 558 aa4.67□□□□□ -1.66
SWD3YBR175W ENV9Q08651 330 aa4.67□□□□□ -1.66
SWD3YBR175W SIT4P20604 311 aa4.66□□□□□ -1.66
SWD3YBR175W GBP2P25555 427 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SWD3YBR175W YNR021WP53723 404 aaKnown RBP4.66□□□□□ -1.66
SWD3YBR175W YNL115CP53925 644 aa4.66□□□□□ -1.66
SWD3YBR175W MET32Q12041 191 aa4.66□□□□□ -1.66
SWD3YBR175W DIT2P21595 489 aa4.65□□□□□ -1.67
SWD3YBR175W AFT1P22149 690 aa4.65□□□□□ -1.67
SWD3YBR175W ASH1P34233 588 aa4.65□□□□□ -1.67
SWD3YBR175W PUS5Q06244 254 aa4.63□□□□□ -1.67
SWD3YBR175W TPD3P31383 635 aa4.62□□□□□ -1.67
SWD3YBR175W YDR444WQ04093 687 aa4.62□□□□□ -1.67
SWD3YBR175W TEA1P47988 759 aa4.61□□□□□ -1.67
SWD3YBR175W LCB5Q06147 687 aaKnown RBP4.61□□□□□ -1.67
SWD3YBR175W AIM7Q12156 149 aa4.61□□□□□ -1.67
SWD3YBR175W KXD1P53158 218 aa4.6□□□□□ -1.67
SWD3YBR175W HST3P53687 447 aa4.6□□□□□ -1.67
SWD3YBR175W NIS1P53939 407 aa4.6□□□□□ -1.67
SWD3YBR175W HXT10P43581 546 aa4.59□□□□□ -1.67
SWD3YBR175W ATF2P53296 535 aa4.59□□□□□ -1.67
SWD3YBR175W YDL176WQ12027 708 aa4.59□□□□□ -1.67
SWD3YBR175W RRD1P40454 393 aaKnown RBP4.58□□□□□ -1.68
SWD3YBR175W YJR115WP47152 169 aa4.58□□□□□ -1.68
SWD3YBR175W PDC1P06169 563 aaKnown RBP4.57□□□□□ -1.68
SWD3YBR175W GLC3P32775 704 aa4.57□□□□□ -1.68
SWD3YBR175W FPK1P53739 893 aa4.56□□□□□ -1.68
SWD3YBR175W KIN1P13185 1064 aa4.55□□□□□ -1.68
SWD3YBR175W MSB3P48566 633 aaPredicted RBP4.55□□□□□ -1.68
SWD3YBR175W SYH1Q02875 849 aaKnown RBP4.55□□□□□ -1.68
SWD3YBR175W SLY41P22215 453 aa4.54□□□□□ -1.68
SWD3YBR175W RPA14P50106 137 aa4.53□□□□□ -1.68
SWD3YBR175W PUS6P53294 404 aa4.53□□□□□ -1.68
SWD3YBR175W YPR097WQ06839 1073 aa4.53□□□□□ -1.68
SWD3YBR175W ACO2P39533 789 aa4.51□□□□□ -1.69
SWD3YBR175W HGH1P48362 394 aaKnown RBP4.51□□□□□ -1.69
SWD3YBR175W HST2P53686 357 aa4.51□□□□□ -1.69
SWD3YBR175W YMR196WQ04336 1088 aa4.51□□□□□ -1.69
SWD3YBR175W ALR1Q08269 859 aa4.51□□□□□ -1.69
SWD3YBR175W MRT4P33201 236 aaKnown RBP4.5□□□□□ -1.69
SWD3YBR175W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SWD3YBR175W SCJ1P25303 377 aa4.49□□□□□ -1.69
SWD3YBR175W UGA3P26370 528 aa4.49□□□□□ -1.69
SWD3YBR175W PTK2P47116 818 aaKnown RBP4.49□□□□□ -1.69
SWD3YBR175W YDL206WQ12424 762 aa4.49□□□□□ -1.69
SWD3YBR175W AIM44Q99299 758 aa4.49□□□□□ -1.69
SWD3YBR175W KIP2P28743 706 aa4.48□□□□□ -1.69
SWD3YBR175W GLN1P32288 370 aaKnown RBP4.48□□□□□ -1.69
SWD3YBR175W OPT2Q06593 877 aa4.48□□□□□ -1.69
SWD3YBR175W TRM1P15565 570 aaKnown RBP4.47□□□□□ -1.69
SWD3YBR175W IXR1P33417 597 aa4.47□□□□□ -1.69
SWD3YBR175W RTT106P40161 455 aa4.47□□□□□ -1.69
SWD3YBR175W CSN12P47130 423 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms