RNA–Protein interactions for RNA: YAL003W

EFB1, Transcript of Translation elongation factor 1 beta, yeastyeast

Gene EFB1, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFB1YAL003W TY1B-GR2Q12269 1755 aa6.55□□□□□ -1.36
EFB1YAL003W TY1B-OLQ12273 1755 aa6.55□□□□□ -1.36
EFB1YAL003W TY1B-PLQ12414 1755 aaKnown RBP6.55□□□□□ -1.36
EFB1YAL003W CDC25P04821 1589 aa6.55□□□□□ -1.36
EFB1YAL003W YML082WQ04533 649 aaKnown RBP6.54□□□□□ -1.36
EFB1YAL003W YGR273CP53329 174 aa6.52□□□□□ -1.37
EFB1YAL003W MPC54Q08550 464 aa6.52□□□□□ -1.37
EFB1YAL003W MYO4P32492 1471 aa6.52□□□□□ -1.37
EFB1YAL003W PAN1P32521 1480 aa6.52□□□□□ -1.37
EFB1YAL003W MMS22Q06164 1454 aa6.52□□□□□ -1.37
EFB1YAL003W RGA2Q06407 1009 aa6.51□□□□□ -1.37
EFB1YAL003W RQC2Q12532 1038 aaKnown RBP6.51□□□□□ -1.37
EFB1YAL003W PTC2P39966 464 aaKnown RBP6.5□□□□□ -1.37
EFB1YAL003W ESC1Q03661 1658 aaKnown RBP6.49□□□□□ -1.37
EFB1YAL003W SPP41P38904 1435 aa6.48□□□□□ -1.37
EFB1YAL003W DNF1P32660 1571 aa6.46□□□□□ -1.38
EFB1YAL003W NMA111P53920 997 aa6.46□□□□□ -1.38
EFB1YAL003W NOP53Q12080 455 aaKnown RBP6.46□□□□□ -1.38
EFB1YAL003W SLI15P38283 698 aa6.45□□□□□ -1.38
EFB1YAL003W RPA190P10964 1664 aaKnown RBP6.45□□□□□ -1.38
EFB1YAL003W TSC11P40061 1430 aa6.44□□□□□ -1.38
EFB1YAL003W YPR015CQ12531 247 aa6.44□□□□□ -1.38
EFB1YAL003W TY1B-JR2P47100 1755 aaKnown RBP6.44□□□□□ -1.38
EFB1YAL003W TY1B-ER2Q03619 1755 aa6.44□□□□□ -1.38
EFB1YAL003W TY1B-MR1Q04214 1755 aa6.44□□□□□ -1.38
EFB1YAL003W TY1B-MR2Q04670 1755 aaKnown RBP6.44□□□□□ -1.38
EFB1YAL003W TY1B-LR1Q12088 1755 aaKnown RBP6.44□□□□□ -1.38
EFB1YAL003W TY1B-NL1Q12112 1755 aa6.44□□□□□ -1.38
EFB1YAL003W TY1B-GR1Q12141 1755 aa6.44□□□□□ -1.38
EFB1YAL003W TY1B-BLQ12490 1755 aa6.44□□□□□ -1.38
EFB1YAL003W RAS1P01119 309 aa6.43□□□□□ -1.38
EFB1YAL003W RGA1P39083 1007 aa6.43□□□□□ -1.38
EFB1YAL003W MET5P47169 1442 aa6.42□□□□□ -1.38
EFB1YAL003W TRM732Q03496 1420 aa6.42□□□□□ -1.38
EFB1YAL003W VTH1P40438 1549 aa6.42□□□□□ -1.38
EFB1YAL003W VTH2P40890 1549 aa6.42□□□□□ -1.38
EFB1YAL003W TAF7Q05021 590 aa6.42□□□□□ -1.38
EFB1YAL003W DPL1Q05567 589 aa6.42□□□□□ -1.38
EFB1YAL003W STH1P32597 1359 aa6.41□□□□□ -1.38
EFB1YAL003W RAM1P22007 431 aa6.4□□□□□ -1.38
EFB1YAL003W SAS10Q12136 610 aaPredicted RBP6.4□□□□□ -1.38
EFB1YAL003W SNQ2P32568 1501 aaKnown RBP6.4□□□□□ -1.39
EFB1YAL003W SNT2P53127 1403 aa6.37□□□□□ -1.39
EFB1YAL003W MLP2P40457 1679 aa6.36□□□□□ -1.39
EFB1YAL003W RPO21P04050 1733 aaKnown RBP6.36□□□□□ -1.39
EFB1YAL003W NTE1Q04958 1679 aa6.35□□□□□ -1.39
EFB1YAL003W NUP159P40477 1460 aa6.34□□□□□ -1.39
EFB1YAL003W KEX1P09620 729 aa6.34□□□□□ -1.39
EFB1YAL003W ISU2Q12056 156 aa6.34□□□□□ -1.39
EFB1YAL003W YRF1-1P0CX20 1796 aa6.33□□□□□ -1.4
EFB1YAL003W YRF1-5P0CX21 1796 aa6.33□□□□□ -1.4
EFB1YAL003W YRF1-8P0CX22 1796 aa6.33□□□□□ -1.4
EFB1YAL003W PDR15Q04182 1529 aaKnown RBP6.32□□□□□ -1.4
EFB1YAL003W CDC73Q06697 393 aa6.32□□□□□ -1.4
EFB1YAL003W ULS1Q08562 1619 aa6.32□□□□□ -1.4
EFB1YAL003W AMS1P22855 1083 aa6.31□□□□□ -1.4
EFB1YAL003W SDH2P21801 266 aa6.3□□□□□ -1.4
EFB1YAL003W RTT106P40161 455 aa6.3□□□□□ -1.4
EFB1YAL003W GEA2P39993 1459 aaKnown RBP6.29□□□□□ -1.4
EFB1YAL003W PDR1P12383 1068 aa6.29□□□□□ -1.4
EFB1YAL003W MET10P39692 1035 aa6.29□□□□□ -1.4
EFB1YAL003W TRK1P12685 1235 aa6.28□□□□□ -1.4
EFB1YAL003W GYP1Q08484 637 aa6.28□□□□□ -1.4
EFB1YAL003W LTE1P07866 1435 aa6.27□□□□□ -1.41
EFB1YAL003W GEA1P47102 1408 aaPredicted RBP6.27□□□□□ -1.41
EFB1YAL003W IFH1P39520 1085 aa6.27□□□□□ -1.41
EFB1YAL003W YLR326WQ06170 240 aaKnown RBP6.27□□□□□ -1.41
EFB1YAL003W VPS15P22219 1454 aa6.26□□□□□ -1.41
EFB1YAL003W IRC20Q06554 1556 aa6.26□□□□□ -1.41
EFB1YAL003W PDR12Q02785 1511 aa6.25□□□□□ -1.41
EFB1YAL003W UBP14P38237 781 aaKnown RBP6.25□□□□□ -1.41
EFB1YAL003W CAT8P39113 1433 aa6.23□□□□□ -1.41
EFB1YAL003W SPO14P36126 1683 aa6.23□□□□□ -1.41
EFB1YAL003W SAS4Q04003 481 aa6.22□□□□□ -1.41
EFB1YAL003W PCS60P38137 543 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
EFB1YAL003W VHR2P40041 505 aa6.21□□□□□ -1.42
EFB1YAL003W GDB1Q06625 1536 aa6.2□□□□□ -1.42
EFB1YAL003W YBT1P32386 1661 aa6.19□□□□□ -1.42
EFB1YAL003W TY3B-GQ99315 1547 aa6.19□□□□□ -1.42
EFB1YAL003W NUP157P40064 1391 aaKnown RBP6.18□□□□□ -1.42
EFB1YAL003W PDR10P51533 1564 aa6.18□□□□□ -1.42
EFB1YAL003W BNI1P41832 1953 aa6.18□□□□□ -1.42
EFB1YAL003W IKI3Q06706 1349 aaKnown RBP6.18□□□□□ -1.42
EFB1YAL003W RAD54P32863 898 aa6.17□□□□□ -1.42
EFB1YAL003W SET1P38827 1080 aaKnown RBP6.17□□□□□ -1.42
EFB1YAL003W BUD3P25558 1636 aa6.17□□□□□ -1.42
EFB1YAL003W YEL077CQ3E7X8 1277 aa6.16□□□□□ -1.42
EFB1YAL003W SEC7P11075 2009 aaKnown RBP6.16□□□□□ -1.42
EFB1YAL003W DRS2P39524 1355 aa6.16□□□□□ -1.42
EFB1YAL003W IQG1Q12280 1495 aa6.15□□□□□ -1.42
EFB1YAL003W NUP170P38181 1502 aa6.15□□□□□ -1.42
EFB1YAL003W ITT1Q04638 464 aa6.15□□□□□ -1.42
EFB1YAL003W BUD20Q08004 166 aaPredicted RBP6.15□□□□□ -1.42
EFB1YAL003W ARO1P08566 1588 aaKnown RBP6.12□□□□□ -1.43
EFB1YAL003W CKB1P43639 278 aa6.11□□□□□ -1.43
EFB1YAL003W YPL062WQ02781 134 aa6.11□□□□□ -1.43
EFB1YAL003W YDR090CQ03193 310 aa6.11□□□□□ -1.43
EFB1YAL003W SRB8P25648 1427 aa6.1□□□□□ -1.43
EFB1YAL003W PRT1P06103 763 aaKnown RBP6.1□□□□□ -1.43
EFB1YAL003W RPP1BP10622 106 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms