RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 CUX1P39880 1505 aa11.65□□□□□ -0.55
CASC19-274ENST00000642018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 BCL11BQ9C0K0 894 aaPredicted RBP11.64□□□□□ -0.55
CASC19-274ENST00000642018 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
CASC19-274ENST00000642018 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
CASC19-274ENST00000642018 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
CASC19-274ENST00000642018 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
CASC19-274ENST00000642018 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
CASC19-274ENST00000642018 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
CASC19-274ENST00000642018 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
CASC19-274ENST00000642018 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
CASC19-274ENST00000642018 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CASC19-274ENST00000642018 NUP160Q12769 1436 aa11.56□□□□□ -0.56
CASC19-274ENST00000642018 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
CASC19-274ENST00000642018 PSEN1P49768 467 aa11.55□□□□□ -0.56
CASC19-274ENST00000642018 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
CASC19-274ENST00000642018 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
CASC19-274ENST00000642018 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
CASC19-274ENST00000642018 MAP3K13O43283 966 aa11.52□□□□□ -0.57
CASC19-274ENST00000642018 EVX2Q03828 476 aa11.52□□□□□ -0.57
CASC19-274ENST00000642018 SHROOM2Q13796 1616 aa11.51□□□□□ -0.57
CASC19-274ENST00000642018 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
CASC19-274ENST00000642018 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
CASC19-274ENST00000642018 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 FAM69CQ0P6D2 419 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 IFNL1Q8IU54 200 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
CASC19-274ENST00000642018 PRG4Q92954 1404 aaPredicted RBP11.48□□□□□ -0.57
CASC19-274ENST00000642018 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
CASC19-274ENST00000642018 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
CASC19-274ENST00000642018 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
CASC19-274ENST00000642018 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
CASC19-274ENST00000642018 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
CASC19-274ENST00000642018 CLCN6P51797 869 aa11.44□□□□□ -0.58
CASC19-274ENST00000642018 TSHZ2Q9NRE2 1034 aa11.44□□□□□ -0.58
CASC19-274ENST00000642018 MAPKBP1O60336 1514 aa11.43□□□□□ -0.58
CASC19-274ENST00000642018 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
CASC19-274ENST00000642018 BCANQ96GW7 911 aa11.41□□□□□ -0.58
CASC19-274ENST00000642018 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
CASC19-274ENST00000642018 BIVM-ERCC5R4GMW8 1640 aa11.4□□□□□ -0.58
CASC19-274ENST00000642018 SOX12O15370 315 aa11.39□□□□□ -0.59
CASC19-274ENST00000642018 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
CASC19-274ENST00000642018 NLRP6P59044 892 aa11.38□□□□□ -0.59
CASC19-274ENST00000642018 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 KDM6BO15054 1643 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
CASC19-274ENST00000642018 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
CASC19-274ENST00000642018 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
CASC19-274ENST00000642018 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
CASC19-274ENST00000642018 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
CASC19-274ENST00000642018 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
CASC19-274ENST00000642018 KDM2AQ9Y2K7 1162 aa11.32□□□□□ -0.6
CASC19-274ENST00000642018 TIE1P35590 1138 aa11.31□□□□□ -0.6
CASC19-274ENST00000642018 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
CASC19-274ENST00000642018 PTPRGP23470 1445 aa11.3□□□□□ -0.6
CASC19-274ENST00000642018 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
CASC19-274ENST00000642018 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
CASC19-274ENST00000642018 PLB1Q6P1J6 1458 aa11.28□□□□□ -0.6
CASC19-274ENST00000642018 TSPOAP1O95153 1857 aa11.27□□□□□ -0.6
CASC19-274ENST00000642018 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 NBR1Q14596 966 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 IGF1RP08069 1367 aa11.26□□□□□ -0.61
CASC19-274ENST00000642018 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 GABBR2O75899 941 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 PHF8Q9UPP1 1060 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
CASC19-274ENST00000642018 GLI2P10070 1586 aa11.24□□□□□ -0.61
CASC19-274ENST00000642018 CUL7Q14999 1698 aa11.24□□□□□ -0.61
CASC19-274ENST00000642018 ASXL2Q76L83 1435 aa11.23□□□□□ -0.61
CASC19-274ENST00000642018 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
CASC19-274ENST00000642018 TEX14Q8IWB6 1497 aa11.22□□□□□ -0.61
CASC19-274ENST00000642018 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
CASC19-274ENST00000642018 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
CASC19-274ENST00000642018 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
CASC19-274ENST00000642018 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
CASC19-274ENST00000642018 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
CASC19-274ENST00000642018 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.627e-8■□□□□ 10.2
CASC19-274ENST00000642018 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 TRPC6Q9Y210 931 aa11.18□□□□□ -0.62
CASC19-274ENST00000642018 G3V3G9 751 aa11.17□□□□□ -0.62
CASC19-274ENST00000642018 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
CASC19-274ENST00000642018 LHX8Q68G74 356 aa11.15□□□□□ -0.62
CASC19-274ENST00000642018 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
CASC19-274ENST00000642018 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
CASC19-274ENST00000642018 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
CASC19-274ENST00000642018 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
CASC19-274ENST00000642018 HECW2Q9P2P5 1572 aa11.13□□□□□ -0.63
CASC19-274ENST00000642018 FAM9AQ8IZU1 332 aaPredicted RBP11.13□□□□□ -0.63
CASC19-274ENST00000642018 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms