RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 NCAPD3P42695 1498 aa17.42■□□□□ 0.38
PTPRVP-205ENST00000641549 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
PTPRVP-205ENST00000641549 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
PTPRVP-205ENST00000641549 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
PTPRVP-205ENST00000641549 HDGFL2Q7Z4V5 671 aaPredicted RBP17.42■□□□□ 0.38
PTPRVP-205ENST00000641549 RALBP1Q15311 655 aa17.4■□□□□ 0.38
PTPRVP-205ENST00000641549 FOXD1Q16676 465 aa17.4■□□□□ 0.38
PTPRVP-205ENST00000641549 KIF3BO15066 747 aa17.39■□□□□ 0.37
PTPRVP-205ENST00000641549 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.375e-6■■■■□ 20.3
PTPRVP-205ENST00000641549 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
PTPRVP-205ENST00000641549 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
PTPRVP-205ENST00000641549 NBR1Q14596 966 aa17.37■□□□□ 0.37
PTPRVP-205ENST00000641549 NCLP19338 710 aaKnown RBP17.37■□□□□ 0.37
PTPRVP-205ENST00000641549 PTPRGP23470 1445 aa17.36■□□□□ 0.37
PTPRVP-205ENST00000641549 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
PTPRVP-205ENST00000641549 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
PTPRVP-205ENST00000641549 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
PTPRVP-205ENST00000641549 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
PTPRVP-205ENST00000641549 IGF1RP08069 1367 aa17.34■□□□□ 0.37
PTPRVP-205ENST00000641549 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.36
PTPRVP-205ENST00000641549 STK26Q9P289 416 aa17.32■□□□□ 0.36
PTPRVP-205ENST00000641549 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPRVP-205ENST00000641549 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
PTPRVP-205ENST00000641549 ERICH6BQ5W0A0 696 aa17.3■□□□□ 0.36
PTPRVP-205ENST00000641549 ARXQ96QS3 562 aa17.3■□□□□ 0.36
PTPRVP-205ENST00000641549 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
PTPRVP-205ENST00000641549 UACAQ9BZF9 1416 aa17.27■□□□□ 0.35
PTPRVP-205ENST00000641549 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.35
PTPRVP-205ENST00000641549 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.35
PTPRVP-205ENST00000641549 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
PTPRVP-205ENST00000641549 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
PTPRVP-205ENST00000641549 RGS3P49796 1198 aa17.25■□□□□ 0.35
PTPRVP-205ENST00000641549 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
PTPRVP-205ENST00000641549 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
PTPRVP-205ENST00000641549 EID1Q9Y6B2 187 aa17.24■□□□□ 0.35
PTPRVP-205ENST00000641549 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
PTPRVP-205ENST00000641549 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
PTPRVP-205ENST00000641549 RAD54L2Q9Y4B4 1467 aa17.22■□□□□ 0.35
PTPRVP-205ENST00000641549 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.355e-9■■■■■ 30.9
PTPRVP-205ENST00000641549 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 CUX1P39880 1505 aa17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
PTPRVP-205ENST00000641549 SOX12O15370 315 aa17.2■□□□□ 0.34
PTPRVP-205ENST00000641549 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
PTPRVP-205ENST00000641549 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
PTPRVP-205ENST00000641549 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
PTPRVP-205ENST00000641549 CFTRP13569 1480 aa17.17■□□□□ 0.34
PTPRVP-205ENST00000641549 ZRSR1Q15695 479 aaKnown RBP17.16■□□□□ 0.34
PTPRVP-205ENST00000641549 VGFO15240 615 aaPredicted RBP17.15■□□□□ 0.34
PTPRVP-205ENST00000641549 KIF15Q9NS87 1388 aa17.15■□□□□ 0.34
PTPRVP-205ENST00000641549 ERICH3Q5RHP9 1530 aa17.15■□□□□ 0.34
PTPRVP-205ENST00000641549 TRIM44Q96DX7 344 aaPredicted RBP17.14■□□□□ 0.34
PTPRVP-205ENST00000641549 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
PTPRVP-205ENST00000641549 NPHP1O15259 732 aa17.14■□□□□ 0.33
PTPRVP-205ENST00000641549 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
PTPRVP-205ENST00000641549 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
PTPRVP-205ENST00000641549 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
PTPRVP-205ENST00000641549 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
PTPRVP-205ENST00000641549 KIF21BO75037 1637 aa17.12■□□□□ 0.33
PTPRVP-205ENST00000641549 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
PTPRVP-205ENST00000641549 KCNJ4P48050 445 aa17.11■□□□□ 0.33
PTPRVP-205ENST00000641549 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
PTPRVP-205ENST00000641549 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
PTPRVP-205ENST00000641549 MCCP23508 829 aa17.11■□□□□ 0.33
PTPRVP-205ENST00000641549 GOLGA2Q08379 1002 aa17.11■□□□□ 0.33
PTPRVP-205ENST00000641549 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
PTPRVP-205ENST00000641549 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
PTPRVP-205ENST00000641549 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
PTPRVP-205ENST00000641549 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
PTPRVP-205ENST00000641549 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
PTPRVP-205ENST00000641549 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■■■■ 34
PTPRVP-205ENST00000641549 FGD1P98174 961 aa17.09■□□□□ 0.33
PTPRVP-205ENST00000641549 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
PTPRVP-205ENST00000641549 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.33
PTPRVP-205ENST00000641549 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.33
PTPRVP-205ENST00000641549 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
PTPRVP-205ENST00000641549 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
PTPRVP-205ENST00000641549 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
PTPRVP-205ENST00000641549 TRAK1Q9UPV9 953 aa17.07■□□□□ 0.32
PTPRVP-205ENST00000641549 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
PTPRVP-205ENST00000641549 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
PTPRVP-205ENST00000641549 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
PTPRVP-205ENST00000641549 USP47Q96K76 1375 aa17.05■□□□□ 0.32
PTPRVP-205ENST00000641549 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
PTPRVP-205ENST00000641549 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
PTPRVP-205ENST00000641549 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
PTPRVP-205ENST00000641549 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
PTPRVP-205ENST00000641549 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
PTPRVP-205ENST00000641549 PANK3Q9H999 370 aa17.03■□□□□ 0.32
PTPRVP-205ENST00000641549 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
PTPRVP-205ENST00000641549 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
PTPRVP-205ENST00000641549 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
PTPRVP-205ENST00000641549 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
PTPRVP-205ENST00000641549 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
PTPRVP-205ENST00000641549 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
PTPRVP-205ENST00000641549 AMPHP49418 695 aa17.01■□□□□ 0.31
PTPRVP-205ENST00000641549 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms