RNA–Protein interactions for RNA: ENST00000641179.1

CASC19-216, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,140 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-216ENST00000641179 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
CASC19-216ENST00000641179 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
CASC19-216ENST00000641179 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
CASC19-216ENST00000641179 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
CASC19-216ENST00000641179 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
CASC19-216ENST00000641179 MICALL2Q8IY33 904 aa14.17□□□□□ -0.14
CASC19-216ENST00000641179 HS3ST6Q96QI5 342 aa14.15□□□□□ -0.14
CASC19-216ENST00000641179 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
CASC19-216ENST00000641179 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
CASC19-216ENST00000641179 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
CASC19-216ENST00000641179 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
CASC19-216ENST00000641179 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
CASC19-216ENST00000641179 KRTAP3-3Q9BYR6 98 aa14.12□□□□□ -0.15
CASC19-216ENST00000641179 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
CASC19-216ENST00000641179 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
CASC19-216ENST00000641179 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
CASC19-216ENST00000641179 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
CASC19-216ENST00000641179 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
CASC19-216ENST00000641179 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
CASC19-216ENST00000641179 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
CASC19-216ENST00000641179 FBXO22Q8NEZ5 403 aa14.06□□□□□ -0.16
CASC19-216ENST00000641179 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
CASC19-216ENST00000641179 ZNF710Q8N1W2 664 aa14.05□□□□□ -0.16
CASC19-216ENST00000641179 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
CASC19-216ENST00000641179 NLRP6P59044 892 aa14.02□□□□□ -0.17
CASC19-216ENST00000641179 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
CASC19-216ENST00000641179 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
CASC19-216ENST00000641179 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
CASC19-216ENST00000641179 RIMBP2O15034 1052 aa14□□□□□ -0.17
CASC19-216ENST00000641179 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
CASC19-216ENST00000641179 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
CASC19-216ENST00000641179 WIZO95785 1651 aa13.96□□□□□ -0.17
CASC19-216ENST00000641179 PKD2Q13563 968 aa13.96□□□□□ -0.17
CASC19-216ENST00000641179 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CASC19-216ENST00000641179 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
CASC19-216ENST00000641179 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
CASC19-216ENST00000641179 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
CASC19-216ENST00000641179 ERBB3P21860 1342 aa13.94□□□□□ -0.18
CASC19-216ENST00000641179 STK25O00506 426 aa13.93□□□□□ -0.18
CASC19-216ENST00000641179 RGL2O15211 777 aa13.89□□□□□ -0.19
CASC19-216ENST00000641179 KIF3CO14782 793 aa13.88□□□□□ -0.19
CASC19-216ENST00000641179 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
CASC19-216ENST00000641179 ZNF687Q8N1G0 1237 aa13.83□□□□□ -0.2
CASC19-216ENST00000641179 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
CASC19-216ENST00000641179 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CASC19-216ENST00000641179 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CASC19-216ENST00000641179 KHSRPQ92945 711 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■□□□□ 9.6
CASC19-216ENST00000641179 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
CASC19-216ENST00000641179 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
CASC19-216ENST00000641179 SLC34A2O95436 690 aa13.73□□□□□ -0.21
CASC19-216ENST00000641179 CFTRP13569 1480 aa13.69□□□□□ -0.22
CASC19-216ENST00000641179 PPP1R37O75864 691 aa13.69□□□□□ -0.22
CASC19-216ENST00000641179 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
CASC19-216ENST00000641179 RNF166Q96A37 237 aaPredicted RBP13.66□□□□□ -0.22
CASC19-216ENST00000641179 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
CASC19-216ENST00000641179 PTGER2P43116 358 aa13.64□□□□□ -0.23
CASC19-216ENST00000641179 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
CASC19-216ENST00000641179 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CASC19-216ENST00000641179 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CASC19-216ENST00000641179 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
CASC19-216ENST00000641179 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
CASC19-216ENST00000641179 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CASC19-216ENST00000641179 LSM11P83369 360 aaKnown RBP eCLIP13.58□□□□□ -0.24
CASC19-216ENST00000641179 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.24
CASC19-216ENST00000641179 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
CASC19-216ENST00000641179 PBX2P40425 430 aa13.57□□□□□ -0.24
CASC19-216ENST00000641179 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
CASC19-216ENST00000641179 FOXK1P85037 733 aa13.55□□□□□ -0.24
CASC19-216ENST00000641179 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CASC19-216ENST00000641179 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
CASC19-216ENST00000641179 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
CASC19-216ENST00000641179 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
CASC19-216ENST00000641179 NESP48681 1621 aa13.47□□□□□ -0.25
CASC19-216ENST00000641179 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
CASC19-216ENST00000641179 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
CASC19-216ENST00000641179 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
CASC19-216ENST00000641179 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
CASC19-216ENST00000641179 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
CASC19-216ENST00000641179 DSG2Q14126 1118 aa13.45□□□□□ -0.26
CASC19-216ENST00000641179 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CASC19-216ENST00000641179 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
CASC19-216ENST00000641179 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.26
CASC19-216ENST00000641179 ARHGAP33O14559 1287 aa13.4□□□□□ -0.26
CASC19-216ENST00000641179 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
CASC19-216ENST00000641179 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
CASC19-216ENST00000641179 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
CASC19-216ENST00000641179 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CASC19-216ENST00000641179 ADGRD1Q6QNK2 874 aa13.36□□□□□ -0.27
CASC19-216ENST00000641179 TK2O00142 265 aa13.34□□□□□ -0.27
CASC19-216ENST00000641179 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CASC19-216ENST00000641179 MRC2Q9UBG0 1479 aa13.34□□□□□ -0.27
CASC19-216ENST00000641179 TBC1D12O60347 775 aa13.33□□□□□ -0.28
CASC19-216ENST00000641179 HRO43593 1189 aa13.32□□□□□ -0.28
CASC19-216ENST00000641179 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CASC19-216ENST00000641179 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
CASC19-216ENST00000641179 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
CASC19-216ENST00000641179 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
CASC19-216ENST00000641179 PSEN2P49810 448 aa13.29□□□□□ -0.28
CASC19-216ENST00000641179 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
CASC19-216ENST00000641179 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms