RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
NECAP1-227ENST00000640648 SETD5Q9C0A6 1442 aa10.51□□□□□ -0.73
NECAP1-227ENST00000640648 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
NECAP1-227ENST00000640648 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
NECAP1-227ENST00000640648 HSPA5P11021 654 aaKnown RBP10.5□□□□□ -0.73
NECAP1-227ENST00000640648 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-227ENST00000640648 FOXD1Q16676 465 aa10.5□□□□□ -0.73
NECAP1-227ENST00000640648 CHMP7Q8WUX9 453 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-227ENST00000640648 RGS3P49796 1198 aa10.49□□□□□ -0.73
NECAP1-227ENST00000640648 WIZO95785 1651 aa10.48□□□□□ -0.73
NECAP1-227ENST00000640648 CARMIL1Q5VZK9 1371 aa10.47□□□□□ -0.73
NECAP1-227ENST00000640648 NOM1Q5C9Z4 860 aaKnown RBP10.47□□□□□ -0.73
NECAP1-227ENST00000640648 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
NECAP1-227ENST00000640648 CUX2O14529 1486 aa10.46□□□□□ -0.73
NECAP1-227ENST00000640648 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-227ENST00000640648 NEUROD2Q15784 382 aa10.46□□□□□ -0.74
NECAP1-227ENST00000640648 CC2D1BQ5T0F9 858 aaKnown RBP10.46□□□□□ -0.74
NECAP1-227ENST00000640648 PLEKHD1A6NEE1 506 aa10.45□□□□□ -0.74
NECAP1-227ENST00000640648 STAG3Q9UJ98 1225 aa10.45□□□□□ -0.74
NECAP1-227ENST00000640648 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-227ENST00000640648 MRE11P49959 708 aa10.45□□□□□ -0.74
NECAP1-227ENST00000640648 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
NECAP1-227ENST00000640648 KNSTRNQ9Y448 316 aa10.44□□□□□ -0.74
NECAP1-227ENST00000640648 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
NECAP1-227ENST00000640648 HMGN5P82970 282 aaKnown RBP10.43□□□□□ -0.74
NECAP1-227ENST00000640648 SYAP1Q96A49 352 aaPredicted RBP10.43□□□□□ -0.74
NECAP1-227ENST00000640648 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
NECAP1-227ENST00000640648 CALD1Q05682 793 aaKnown RBP10.42□□□□□ -0.74
NECAP1-227ENST00000640648 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
NECAP1-227ENST00000640648 HTATSF1O43719 755 aaKnown RBP10.42□□□□□ -0.74
NECAP1-227ENST00000640648 DCAF11Q8TEB1 546 aa10.41□□□□□ -0.74
NECAP1-227ENST00000640648 ZNF771Q7L3S4 317 aaPredicted RBP10.41□□□□□ -0.74
NECAP1-227ENST00000640648 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
NECAP1-227ENST00000640648 CHMP4BQ9H444 224 aaKnown RBP10.41□□□□□ -0.74
NECAP1-227ENST00000640648 GPS2Q13227 327 aa10.4□□□□□ -0.74
NECAP1-227ENST00000640648 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
NECAP1-227ENST00000640648 CWC15Q9P013 229 aaKnown RBP10.4□□□□□ -0.74
NECAP1-227ENST00000640648 ARHGAP35Q9NRY4 1499 aa10.4□□□□□ -0.75
NECAP1-227ENST00000640648 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
NECAP1-227ENST00000640648 AXDND1Q5T1B0 1012 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-227ENST00000640648 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
NECAP1-227ENST00000640648 PDCL2Q8N4E4 241 aa10.39□□□□□ -0.75
NECAP1-227ENST00000640648 PDE3BQ13370 1112 aa10.39□□□□□ -0.75
NECAP1-227ENST00000640648 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
NECAP1-227ENST00000640648 HSP90B1P14625 803 aaKnown RBP10.37□□□□□ -0.75
NECAP1-227ENST00000640648 PHF14O94880 888 aa10.37□□□□□ -0.75
NECAP1-227ENST00000640648 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
NECAP1-227ENST00000640648 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
NECAP1-227ENST00000640648 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
NECAP1-227ENST00000640648 TPM3P06753 285 aa10.35□□□□□ -0.75
NECAP1-227ENST00000640648 PKD2Q13563 968 aa10.35□□□□□ -0.75
NECAP1-227ENST00000640648 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
NECAP1-227ENST00000640648 FTSJ3Q8IY81 847 aaKnown RBP10.35□□□□□ -0.75
NECAP1-227ENST00000640648 ESF1Q9H501 851 aaKnown RBP10.35□□□□□ -0.75
NECAP1-227ENST00000640648 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
NECAP1-227ENST00000640648 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-227ENST00000640648 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
NECAP1-227ENST00000640648 NUDCQ9Y266 331 aa10.34□□□□□ -0.75
NECAP1-227ENST00000640648 EIF4G1Q04637 1599 aaKnown RBP10.34□□□□□ -0.75
NECAP1-227ENST00000640648 LETM1O95202 739 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-227ENST00000640648 HSP90AB1P08238 724 aaKnown RBP10.33□□□□□ -0.76
NECAP1-227ENST00000640648 PDE4AP27815 886 aa10.33□□□□□ -0.76
NECAP1-227ENST00000640648 NFKBIBQ15653 356 aa10.33□□□□□ -0.76
NECAP1-227ENST00000640648 GTPBP4Q9BZE4 634 aaKnown RBP10.33□□□□□ -0.76
NECAP1-227ENST00000640648 CASC1Q6TDU7 716 aa10.33□□□□□ -0.76
NECAP1-227ENST00000640648 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
NECAP1-227ENST00000640648 CCDC173Q0VFZ6 552 aa10.33□□□□□ -0.76
NECAP1-227ENST00000640648 BRD2P25440 801 aaKnown RBP10.32□□□□□ -0.76
NECAP1-227ENST00000640648 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-227ENST00000640648 DNAJC2Q99543 621 aaKnown RBP10.32□□□□□ -0.76
NECAP1-227ENST00000640648 CFAP53Q96M91 514 aa10.32□□□□□ -0.76
NECAP1-227ENST00000640648 FAM13BQ9NYF5 915 aa10.32□□□□□ -0.76
NECAP1-227ENST00000640648 CLGNO14967 610 aa10.32□□□□□ -0.76
NECAP1-227ENST00000640648 FHOD3Q2V2M9 1422 aa10.31□□□□□ -0.76
NECAP1-227ENST00000640648 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
NECAP1-227ENST00000640648 CTR9Q6PD62 1173 aa10.31□□□□□ -0.76
NECAP1-227ENST00000640648 ZBED9Q6R2W3 1325 aa10.31□□□□□ -0.76
NECAP1-227ENST00000640648 RBM10P98175 930 aaKnown RBP10.31□□□□□ -0.76
NECAP1-227ENST00000640648 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
NECAP1-227ENST00000640648 USP8P40818 1118 aa10.3□□□□□ -0.76
NECAP1-227ENST00000640648 TERF1P54274 439 aa10.3□□□□□ -0.76
NECAP1-227ENST00000640648 TMF1P82094 1093 aa10.3□□□□□ -0.76
NECAP1-227ENST00000640648 CALCOCO1Q9P1Z2 691 aa10.3□□□□□ -0.76
NECAP1-227ENST00000640648 TPRNQ4KMQ1 711 aa10.3□□□□□ -0.76
NECAP1-227ENST00000640648 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
NECAP1-227ENST00000640648 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
NECAP1-227ENST00000640648 KIF20AO95235 890 aa10.29□□□□□ -0.76
NECAP1-227ENST00000640648 CLCN1P35523 988 aa10.29□□□□□ -0.76
NECAP1-227ENST00000640648 CCDC39Q9UFE4 941 aa10.29□□□□□ -0.76
NECAP1-227ENST00000640648 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-227ENST00000640648 IRX3P78415 501 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-227ENST00000640648 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
NECAP1-227ENST00000640648 TDRD9Q8NDG6 1382 aaKnown RBP10.28□□□□□ -0.76
NECAP1-227ENST00000640648 FMN1Q68DA7 1419 aa10.28□□□□□ -0.76
NECAP1-227ENST00000640648 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
NECAP1-227ENST00000640648 AAMPQ13685 434 aa10.28□□□□□ -0.76
NECAP1-227ENST00000640648 CENPQQ7L2Z9 268 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-227ENST00000640648 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.76
NECAP1-227ENST00000640648 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
NECAP1-227ENST00000640648 CHMP5Q9NZZ3 219 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms