RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-222ENST00000640027 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
MED17-222ENST00000640027 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.44
MED17-222ENST00000640027 KANK1Q14678 1352 aa17.83■□□□□ 0.44
MED17-222ENST00000640027 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
MED17-222ENST00000640027 STK26Q9P289 416 aa17.82■□□□□ 0.44
MED17-222ENST00000640027 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
MED17-222ENST00000640027 RTF1Q92541 710 aaKnown RBP17.81■□□□□ 0.44
MED17-222ENST00000640027 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
MED17-222ENST00000640027 NRDCO43847 1150 aa17.8■□□□□ 0.44
MED17-222ENST00000640027 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
MED17-222ENST00000640027 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
MED17-222ENST00000640027 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
MED17-222ENST00000640027 CFTRP13569 1480 aa17.78■□□□□ 0.44
MED17-222ENST00000640027 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
MED17-222ENST00000640027 CSB-PGBD3P0DP91 1061 aa17.78■□□□□ 0.44
MED17-222ENST00000640027 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
MED17-222ENST00000640027 CLSTN1O94985 981 aa17.76■□□□□ 0.43
MED17-222ENST00000640027 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
MED17-222ENST00000640027 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
MED17-222ENST00000640027 HDGFL2Q7Z4V5 671 aaPredicted RBP17.73■□□□□ 0.43
MED17-222ENST00000640027 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
MED17-222ENST00000640027 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
MED17-222ENST00000640027 APBB1O00213 710 aa17.72■□□□□ 0.43
MED17-222ENST00000640027 KIF21BO75037 1637 aa17.7■□□□□ 0.42
MED17-222ENST00000640027 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
MED17-222ENST00000640027 MCCP23508 829 aa17.69■□□□□ 0.42
MED17-222ENST00000640027 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
MED17-222ENST00000640027 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
MED17-222ENST00000640027 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
MED17-222ENST00000640027 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
MED17-222ENST00000640027 CUX1P39880 1505 aa17.68■□□□□ 0.42
MED17-222ENST00000640027 PKD2Q13563 968 aa17.67■□□□□ 0.42
MED17-222ENST00000640027 HSCBQ8IWL3 235 aa17.66■□□□□ 0.42
MED17-222ENST00000640027 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
MED17-222ENST00000640027 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
MED17-222ENST00000640027 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
MED17-222ENST00000640027 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
MED17-222ENST00000640027 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
MED17-222ENST00000640027 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
MED17-222ENST00000640027 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
MED17-222ENST00000640027 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.42
MED17-222ENST00000640027 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
MED17-222ENST00000640027 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
MED17-222ENST00000640027 GORABQ5T7V8 394 aa17.6■□□□□ 0.41
MED17-222ENST00000640027 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
MED17-222ENST00000640027 TIMELESSQ9UNS1 1208 aa17.6■□□□□ 0.41
MED17-222ENST00000640027 NAP1L5Q96NT1 182 aaPredicted RBP17.6■□□□□ 0.41
MED17-222ENST00000640027 STK31Q9BXU1 1019 aa17.59■□□□□ 0.41
MED17-222ENST00000640027 KIF3BO15066 747 aa17.58■□□□□ 0.4
MED17-222ENST00000640027 FOXD1Q16676 465 aa17.57■□□□□ 0.4
MED17-222ENST00000640027 SPRYD3Q8NCJ5 442 aa17.57■□□□□ 0.4
MED17-222ENST00000640027 NGDNQ8NEJ9 315 aaKnown RBP17.57■□□□□ 0.4
MED17-222ENST00000640027 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
MED17-222ENST00000640027 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
MED17-222ENST00000640027 CUX2O14529 1486 aa17.56■□□□□ 0.4
MED17-222ENST00000640027 EID1Q9Y6B2 187 aa17.56■□□□□ 0.4
MED17-222ENST00000640027 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
MED17-222ENST00000640027 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
MED17-222ENST00000640027 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
MED17-222ENST00000640027 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
MED17-222ENST00000640027 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
MED17-222ENST00000640027 DRC7Q8IY82 874 aa17.54■□□□□ 0.4
MED17-222ENST00000640027 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
MED17-222ENST00000640027 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
MED17-222ENST00000640027 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
MED17-222ENST00000640027 KTN1Q86UP2 1357 aaKnown RBP17.53■□□□□ 0.4
MED17-222ENST00000640027 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
MED17-222ENST00000640027 NUP155O75694 1391 aa17.53■□□□□ 0.4
MED17-222ENST00000640027 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.4
MED17-222ENST00000640027 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
MED17-222ENST00000640027 PRXQ9BXM0 1461 aa17.52■□□□□ 0.39
MED17-222ENST00000640027 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.39
MED17-222ENST00000640027 TERF2IPQ9NYB0 399 aa17.52■□□□□ 0.39
MED17-222ENST00000640027 G3V3G9 751 aa17.51■□□□□ 0.39
MED17-222ENST00000640027 L1TD1Q5T7N2 865 aaKnown RBP17.51■□□□□ 0.39
MED17-222ENST00000640027 DCAF8Q5TAQ9 597 aa17.51■□□□□ 0.39
MED17-222ENST00000640027 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
MED17-222ENST00000640027 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
MED17-222ENST00000640027 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
MED17-222ENST00000640027 AMPHP49418 695 aa17.49■□□□□ 0.39
MED17-222ENST00000640027 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
MED17-222ENST00000640027 FGD5Q6ZNL6 1462 aa17.49■□□□□ 0.39
MED17-222ENST00000640027 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
MED17-222ENST00000640027 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
MED17-222ENST00000640027 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
MED17-222ENST00000640027 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
MED17-222ENST00000640027 ROCK2O75116 1388 aaKnown RBP17.46■□□□□ 0.39
MED17-222ENST00000640027 MSNP26038 577 aaKnown RBP17.45■□□□□ 0.38
MED17-222ENST00000640027 HMMRO75330 724 aa17.45■□□□□ 0.38
MED17-222ENST00000640027 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
MED17-222ENST00000640027 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
MED17-222ENST00000640027 NESP48681 1621 aa17.45■□□□□ 0.38
MED17-222ENST00000640027 MPHOSPH9Q99550 1183 aa17.45■□□□□ 0.38
MED17-222ENST00000640027 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
MED17-222ENST00000640027 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
MED17-222ENST00000640027 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
MED17-222ENST00000640027 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
MED17-222ENST00000640027 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
MED17-222ENST00000640027 CCDC34Q96HJ3 373 aa17.44■□□□□ 0.38
MED17-222ENST00000640027 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms