RNA–Protein interactions for RNA: ENST00000639589.1

PRICKLE1-213, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-213ENST00000639589 POGZQ7Z3K3 1410 aa12.35□□□□□ -0.43
PRICKLE1-213ENST00000639589 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
PRICKLE1-213ENST00000639589 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
PRICKLE1-213ENST00000639589 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
PRICKLE1-213ENST00000639589 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
PRICKLE1-213ENST00000639589 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
PRICKLE1-213ENST00000639589 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
PRICKLE1-213ENST00000639589 FOXD1Q16676 465 aa12.31□□□□□ -0.44
PRICKLE1-213ENST00000639589 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
PRICKLE1-213ENST00000639589 NUP155O75694 1391 aa12.3□□□□□ -0.44
PRICKLE1-213ENST00000639589 SAFB2Q14151 953 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRICKLE1-213ENST00000639589 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
PRICKLE1-213ENST00000639589 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRICKLE1-213ENST00000639589 TMF1P82094 1093 aa12.29□□□□□ -0.44
PRICKLE1-213ENST00000639589 DCAF11Q8TEB1 546 aa12.29□□□□□ -0.44
PRICKLE1-213ENST00000639589 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
PRICKLE1-213ENST00000639589 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
PRICKLE1-213ENST00000639589 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
PRICKLE1-213ENST00000639589 PKD2Q13563 968 aa12.28□□□□□ -0.44
PRICKLE1-213ENST00000639589 CASC1Q6TDU7 716 aa12.28□□□□□ -0.44
PRICKLE1-213ENST00000639589 IGF1RP08069 1367 aa12.27□□□□□ -0.44
PRICKLE1-213ENST00000639589 FTSJ3Q8IY81 847 aaKnown RBP12.27□□□□□ -0.44
PRICKLE1-213ENST00000639589 SOX12O15370 315 aa12.27□□□□□ -0.45
PRICKLE1-213ENST00000639589 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
PRICKLE1-213ENST00000639589 NGDNQ8NEJ9 315 aaKnown RBP12.26□□□□□ -0.45
PRICKLE1-213ENST00000639589 EIF5BO60841 1220 aaKnown RBP12.25□□□□□ -0.45
PRICKLE1-213ENST00000639589 ATF3P18847 181 aa12.25□□□□□ -0.45
PRICKLE1-213ENST00000639589 EIF3AQ14152 1382 aaKnown RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 POLA1P09884 1462 aaPredicted RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 UACAQ9BZF9 1416 aa12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 TMX4Q9H1E5 349 aaPredicted RBP12.24□□□□□ -0.45
PRICKLE1-213ENST00000639589 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
PRICKLE1-213ENST00000639589 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
PRICKLE1-213ENST00000639589 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
PRICKLE1-213ENST00000639589 MIER1Q8N108 512 aa12.22□□□□□ -0.45
PRICKLE1-213ENST00000639589 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
PRICKLE1-213ENST00000639589 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
PRICKLE1-213ENST00000639589 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.45
PRICKLE1-213ENST00000639589 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
PRICKLE1-213ENST00000639589 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
PRICKLE1-213ENST00000639589 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
PRICKLE1-213ENST00000639589 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
PRICKLE1-213ENST00000639589 EVA1CP58658 441 aa12.2□□□□□ -0.46
PRICKLE1-213ENST00000639589 BECN1Q14457 450 aa12.2□□□□□ -0.46
PRICKLE1-213ENST00000639589 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
PRICKLE1-213ENST00000639589 MS4A1P11836 297 aa12.19□□□□□ -0.46
PRICKLE1-213ENST00000639589 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
PRICKLE1-213ENST00000639589 OS9Q13438 667 aaPredicted RBP12.18□□□□□ -0.46
PRICKLE1-213ENST00000639589 MORC1Q86VD1 984 aa12.18□□□□□ -0.46
PRICKLE1-213ENST00000639589 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
PRICKLE1-213ENST00000639589 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
PRICKLE1-213ENST00000639589 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
PRICKLE1-213ENST00000639589 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
PRICKLE1-213ENST00000639589 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
PRICKLE1-213ENST00000639589 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
PRICKLE1-213ENST00000639589 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
PRICKLE1-213ENST00000639589 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
PRICKLE1-213ENST00000639589 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
PRICKLE1-213ENST00000639589 FRAT1Q92837 279 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-213ENST00000639589 KIAA0586Q9BVV6 1533 aa12.12□□□□□ -0.47
PRICKLE1-213ENST00000639589 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
PRICKLE1-213ENST00000639589 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
PRICKLE1-213ENST00000639589 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
PRICKLE1-213ENST00000639589 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
PRICKLE1-213ENST00000639589 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
PRICKLE1-213ENST00000639589 SENP3-EIF4A1A0A087X0R7 540 aa12.11□□□□□ -0.47
PRICKLE1-213ENST00000639589 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 KTN1Q86UP2 1357 aaKnown RBP12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 PSME1Q06323 249 aa12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
PRICKLE1-213ENST00000639589 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
PRICKLE1-213ENST00000639589 AMPHP49418 695 aa12.09□□□□□ -0.47
PRICKLE1-213ENST00000639589 CUX1P39880 1505 aa12.09□□□□□ -0.47
PRICKLE1-213ENST00000639589 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
PRICKLE1-213ENST00000639589 MSH5O43196 834 aa12.08□□□□□ -0.48
PRICKLE1-213ENST00000639589 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
PRICKLE1-213ENST00000639589 GRIN2AQ12879 1464 aa12.08□□□□□ -0.48
PRICKLE1-213ENST00000639589 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
PRICKLE1-213ENST00000639589 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
PRICKLE1-213ENST00000639589 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
PRICKLE1-213ENST00000639589 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
PRICKLE1-213ENST00000639589 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
PRICKLE1-213ENST00000639589 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
PRICKLE1-213ENST00000639589 NBR1Q14596 966 aa12.06□□□□□ -0.48
PRICKLE1-213ENST00000639589 TOP2BQ02880 1626 aa12.06□□□□□ -0.48
PRICKLE1-213ENST00000639589 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
PRICKLE1-213ENST00000639589 EFCAB5A4FU69 1503 aa12.05□□□□□ -0.48
PRICKLE1-213ENST00000639589 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 RAPGEF3O95398 923 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 KCNJ4P48050 445 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 SCAPERQ9BY12 1400 aa12.04□□□□□ -0.48
PRICKLE1-213ENST00000639589 KIF15Q9NS87 1388 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms