RNA–Protein interactions for RNA: ENST00000639090.1

KCNMA1-251, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-251ENST00000639090 CCER2I3L3R5 266 aa20.91■□□□□ 0.94
KCNMA1-251ENST00000639090 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
KCNMA1-251ENST00000639090 NUTM2DQ5VT03 806 aaPredicted RBP20.88■□□□□ 0.93
KCNMA1-251ENST00000639090 ROCK2O75116 1388 aaKnown RBP20.87■□□□□ 0.93
KCNMA1-251ENST00000639090 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
KCNMA1-251ENST00000639090 SPAG9O60271 1321 aaKnown RBP20.86■□□□□ 0.93
KCNMA1-251ENST00000639090 BECN1Q14457 450 aa20.86■□□□□ 0.93
KCNMA1-251ENST00000639090 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
KCNMA1-251ENST00000639090 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
KCNMA1-251ENST00000639090 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
KCNMA1-251ENST00000639090 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
KCNMA1-251ENST00000639090 KTN1Q86UP2 1357 aaKnown RBP20.8■□□□□ 0.92
KCNMA1-251ENST00000639090 IGF1RP08069 1367 aa20.78■□□□□ 0.92
KCNMA1-251ENST00000639090 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
KCNMA1-251ENST00000639090 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.91
KCNMA1-251ENST00000639090 CCDC18Q5T9S5 1454 aa20.76■□□□□ 0.91
KCNMA1-251ENST00000639090 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
KCNMA1-251ENST00000639090 TPRNQ4KMQ1 711 aa20.75■□□□□ 0.91
KCNMA1-251ENST00000639090 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
KCNMA1-251ENST00000639090 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
KCNMA1-251ENST00000639090 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
KCNMA1-251ENST00000639090 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
KCNMA1-251ENST00000639090 NUTM2FA1L443 756 aa20.72■□□□□ 0.91
KCNMA1-251ENST00000639090 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
KCNMA1-251ENST00000639090 TRAK1Q9UPV9 953 aa20.72■□□□□ 0.91
KCNMA1-251ENST00000639090 PTPRGP23470 1445 aa20.72■□□□□ 0.91
KCNMA1-251ENST00000639090 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
KCNMA1-251ENST00000639090 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
KCNMA1-251ENST00000639090 MS4A1P11836 297 aa20.7■□□□□ 0.9
KCNMA1-251ENST00000639090 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
KCNMA1-251ENST00000639090 RALBP1Q15311 655 aa20.69■□□□□ 0.9
KCNMA1-251ENST00000639090 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
KCNMA1-251ENST00000639090 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
KCNMA1-251ENST00000639090 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
KCNMA1-251ENST00000639090 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
KCNMA1-251ENST00000639090 GOLGA6L22H0YM25 854 aa20.66■□□□□ 0.9
KCNMA1-251ENST00000639090 RTF1Q92541 710 aaKnown RBP20.66■□□□□ 0.9
KCNMA1-251ENST00000639090 APBB1O00213 710 aa20.65■□□□□ 0.9
KCNMA1-251ENST00000639090 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
KCNMA1-251ENST00000639090 CHMP4BQ9H444 224 aaKnown RBP20.64■□□□□ 0.9
KCNMA1-251ENST00000639090 NLRP13Q86W25 1043 aa20.64■□□□□ 0.89
KCNMA1-251ENST00000639090 CCDC146Q8IYE0 955 aa20.64■□□□□ 0.89
KCNMA1-251ENST00000639090 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
KCNMA1-251ENST00000639090 NPHP1O15259 732 aa20.6■□□□□ 0.89
KCNMA1-251ENST00000639090 CLUAP1Q96AJ1 413 aa20.59■□□□□ 0.89
KCNMA1-251ENST00000639090 TERF2IPQ9NYB0 399 aa20.59■□□□□ 0.89
KCNMA1-251ENST00000639090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.89
KCNMA1-251ENST00000639090 PANK3Q9H999 370 aa20.58■□□□□ 0.89
KCNMA1-251ENST00000639090 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.89
KCNMA1-251ENST00000639090 CCDC144AA2RUR9 1427 aa20.58■□□□□ 0.88
KCNMA1-251ENST00000639090 KCNJ4P48050 445 aa20.57■□□□□ 0.88
KCNMA1-251ENST00000639090 NOP58Q9Y2X3 529 aaKnown RBP20.57■□□□□ 0.88
KCNMA1-251ENST00000639090 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
KCNMA1-251ENST00000639090 RBM19Q9Y4C8 960 aaKnown RBP20.57■□□□□ 0.88
KCNMA1-251ENST00000639090 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
KCNMA1-251ENST00000639090 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
KCNMA1-251ENST00000639090 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
KCNMA1-251ENST00000639090 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
KCNMA1-251ENST00000639090 FGD1P98174 961 aa20.54■□□□□ 0.88
KCNMA1-251ENST00000639090 IPO8O15397 1037 aaKnown RBP20.54■□□□□ 0.88
KCNMA1-251ENST00000639090 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 SPRYD3Q8NCJ5 442 aa20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
KCNMA1-251ENST00000639090 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.88
KCNMA1-251ENST00000639090 ITPRIPQ8IWB1 547 aa20.52■□□□□ 0.88
KCNMA1-251ENST00000639090 PRKRIP1Q9H875 184 aaPredicted RBP20.52■□□□□ 0.88
KCNMA1-251ENST00000639090 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
KCNMA1-251ENST00000639090 ZNF330Q9Y3S2 320 aaPredicted RBP20.51■□□□□ 0.87
KCNMA1-251ENST00000639090 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
KCNMA1-251ENST00000639090 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
KCNMA1-251ENST00000639090 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
KCNMA1-251ENST00000639090 USP47Q96K76 1375 aa20.46■□□□□ 0.87
KCNMA1-251ENST00000639090 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
KCNMA1-251ENST00000639090 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
KCNMA1-251ENST00000639090 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
KCNMA1-251ENST00000639090 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
KCNMA1-251ENST00000639090 AMPHP49418 695 aa20.44■□□□□ 0.86
KCNMA1-251ENST00000639090 ZRSR1Q15695 479 aaKnown RBP20.44■□□□□ 0.86
KCNMA1-251ENST00000639090 PLCB2Q00722 1185 aa20.44■□□□□ 0.86
KCNMA1-251ENST00000639090 BCL2L13Q9BXK5 485 aa20.44■□□□□ 0.86
KCNMA1-251ENST00000639090 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
KCNMA1-251ENST00000639090 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
KCNMA1-251ENST00000639090 AFAP1Q8N556 730 aa20.42■□□□□ 0.86
KCNMA1-251ENST00000639090 RWDD1Q9H446 243 aaPredicted RBP20.42■□□□□ 0.86
KCNMA1-251ENST00000639090 MYBBP1AQ9BQG0 1328 aaKnown RBP20.42■□□□□ 0.86
KCNMA1-251ENST00000639090 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
KCNMA1-251ENST00000639090 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
KCNMA1-251ENST00000639090 MYOM3Q5VTT5 1437 aa20.41■□□□□ 0.86
KCNMA1-251ENST00000639090 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
KCNMA1-251ENST00000639090 SLC4A10Q6U841 1118 aa20.41■□□□□ 0.86
KCNMA1-251ENST00000639090 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
KCNMA1-251ENST00000639090 PLIN1O60240 522 aa20.39■□□□□ 0.85
KCNMA1-251ENST00000639090 CENPJQ9HC77 1338 aaPredicted RBP20.39■□□□□ 0.85
KCNMA1-251ENST00000639090 PDE3BQ13370 1112 aa20.39■□□□□ 0.85
KCNMA1-251ENST00000639090 KIF21BO75037 1637 aa20.38■□□□□ 0.85
KCNMA1-251ENST00000639090 NESP48681 1621 aa20.38■□□□□ 0.85
KCNMA1-251ENST00000639090 FAM69CQ0P6D2 419 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms