RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 ABCC5O15440 1437 aa32.08■■■□□ 2.73
SCARB2-212ENST00000638663 KCNH8Q96L42 1107 aa32.08■■■□□ 2.73
SCARB2-212ENST00000638663 RRP7BPQ9NSQ0 103 aa32.06■■■□□ 2.72
SCARB2-212ENST00000638663 CLSPNQ9HAW4 1339 aa32.06■■■□□ 2.72
SCARB2-212ENST00000638663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.06■■■□□ 2.72
SCARB2-212ENST00000638663 TTC37Q6PGP7 1564 aa32.05■■■□□ 2.72
SCARB2-212ENST00000638663 AKNAQ7Z591 1439 aa32.01■■■□□ 2.72
SCARB2-212ENST00000638663 PREX2Q70Z35 1606 aa32.01■■■□□ 2.72
SCARB2-212ENST00000638663 CDC42BPBQ9Y5S2 1711 aa31.99■■■□□ 2.71
SCARB2-212ENST00000638663 GCC2Q8IWJ2 1684 aa31.97■■■□□ 2.71
SCARB2-212ENST00000638663 ROCK1Q13464 1354 aa31.96■■■□□ 2.71
SCARB2-212ENST00000638663 WDR7Q9Y4E6 1490 aa31.93■■■□□ 2.7
SCARB2-212ENST00000638663 MYO5CQ9NQX4 1742 aa31.92■■■□□ 2.7
SCARB2-212ENST00000638663 ARHGAP5Q13017 1502 aa31.92■■■□□ 2.7
SCARB2-212ENST00000638663 MAPKBP1O60336 1514 aa31.91■■■□□ 2.7
SCARB2-212ENST00000638663 SAMD9LQ8IVG5 1584 aa31.91■■■□□ 2.7
SCARB2-212ENST00000638663 CROCC2H7BZ55 1655 aa31.9■■■□□ 2.7
SCARB2-212ENST00000638663 NPM1P06748 294 aaKnown RBP eCLIP31.87■■■□□ 2.69
SCARB2-212ENST00000638663 HNRNPMP52272 730 aaKnown RBP eCLIP31.87■■■□□ 2.69
SCARB2-212ENST00000638663 KDM6BO15054 1643 aa31.87■■■□□ 2.69
SCARB2-212ENST00000638663 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
SCARB2-212ENST00000638663 PLCH2O75038 1416 aa31.84■■■□□ 2.69
SCARB2-212ENST00000638663 ADGBQ8N7X0 1667 aa31.84■■■□□ 2.69
SCARB2-212ENST00000638663 MBD5Q9P267 1494 aa31.83■■■□□ 2.69
SCARB2-212ENST00000638663 NCOA1Q15788 1441 aa31.82■■■□□ 2.68
SCARB2-212ENST00000638663 ARHGEF5Q12774 1597 aa31.82■■■□□ 2.68
SCARB2-212ENST00000638663 ADGRL2O95490 1459 aa31.82■■■□□ 2.68
SCARB2-212ENST00000638663 SHANK2Q9UPX8 1470 aa31.8■■■□□ 2.68
SCARB2-212ENST00000638663 C9orf84Q5VXU9 1444 aa31.79■■■□□ 2.68
SCARB2-212ENST00000638663 ANKRD30AQ9BXX3 1397 aa31.78■■■□□ 2.68
SCARB2-212ENST00000638663 SYCP2Q9BX26 1530 aa31.78■■■□□ 2.68
SCARB2-212ENST00000638663 TSPY4P0CV99 314 aa31.78■■■□□ 2.68
SCARB2-212ENST00000638663 TSPY10P0CW01 314 aa31.78■■■□□ 2.68
SCARB2-212ENST00000638663 CCDC141Q6ZP82 1450 aa31.76■■■□□ 2.68
SCARB2-212ENST00000638663 RIMBP3CA6NJZ7 1639 aa31.76■■■□□ 2.68
SCARB2-212ENST00000638663 RIMBP3BA6NNM3 1639 aa31.76■■■□□ 2.68
SCARB2-212ENST00000638663 RIMBP3Q9UFD9 1639 aa31.76■■■□□ 2.68
SCARB2-212ENST00000638663 EFCAB2Q5VUJ9 269 aa31.76■■■□□ 2.67
SCARB2-212ENST00000638663 TRIM52Q96A61 297 aa31.76■■■□□ 2.67
SCARB2-212ENST00000638663 PLEKHH2Q8IVE3 1493 aa31.74■■■□□ 2.67
SCARB2-212ENST00000638663 RSPH4AQ5TD94 716 aa31.74■■■□□ 2.67
SCARB2-212ENST00000638663 CYB5RLQ6IPT4 315 aa31.73■■■□□ 2.67
SCARB2-212ENST00000638663 ABCA9Q8IUA7 1624 aa31.73■■■□□ 2.67
SCARB2-212ENST00000638663 KIAA1107Q9UPP5 1409 aa31.72■■■□□ 2.67
SCARB2-212ENST00000638663 ARAP3Q8WWN8 1544 aa31.7■■■□□ 2.66
SCARB2-212ENST00000638663 ARHGEF12Q9NZN5 1544 aa31.67■■■□□ 2.66
SCARB2-212ENST00000638663 SIN3AQ96ST3 1273 aa31.67■■■□□ 2.66
SCARB2-212ENST00000638663 ACIN1Q9UKV3 1341 aaKnown RBP31.64■■■□□ 2.66
SCARB2-212ENST00000638663 ABCC1P33527 1531 aa31.64■■■□□ 2.66
SCARB2-212ENST00000638663 ANKRD50Q9ULJ7 1429 aa31.63■■■□□ 2.65
SCARB2-212ENST00000638663 NEUROD1Q13562 356 aa31.63■■■□□ 2.65
SCARB2-212ENST00000638663 KIF15Q9NS87 1388 aa31.61■■■□□ 2.65
SCARB2-212ENST00000638663 MPHOSPH9Q99550 1183 aa31.6■■■□□ 2.65
SCARB2-212ENST00000638663 FANCAO15360 1455 aa31.6■■■□□ 2.65
SCARB2-212ENST00000638663 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
SCARB2-212ENST00000638663 DENND4BO75064 1496 aaPredicted RBP31.59■■■□□ 2.65
SCARB2-212ENST00000638663 TRAPPC8Q9Y2L5 1435 aa31.56■■■□□ 2.64
SCARB2-212ENST00000638663 CD109Q6YHK3 1445 aa31.5■■■□□ 2.63
SCARB2-212ENST00000638663 SLC4A1APQ9BWU0 796 aaKnown RBP31.49■■■□□ 2.63
SCARB2-212ENST00000638663 PLXNC1O60486 1568 aa31.47■■■□□ 2.63
SCARB2-212ENST00000638663 PZPP20742 1482 aa31.47■■■□□ 2.63
SCARB2-212ENST00000638663 ADGRL1O94910 1474 aa31.47■■■□□ 2.63
SCARB2-212ENST00000638663 FOXD1Q16676 465 aa31.46■■■□□ 2.63
SCARB2-212ENST00000638663 AFAP1Q8N556 730 aa31.46■■■□□ 2.63
SCARB2-212ENST00000638663 TIMELESSQ9UNS1 1208 aa31.45■■■□□ 2.62
SCARB2-212ENST00000638663 SCAPERQ9BY12 1400 aa31.44■■■□□ 2.62
SCARB2-212ENST00000638663 SPAG9O60271 1321 aaKnown RBP31.43■■■□□ 2.62
SCARB2-212ENST00000638663 NUP155O75694 1391 aa31.4■■■□□ 2.62
SCARB2-212ENST00000638663 ZNF316A6NFI3 1004 aaPredicted RBP31.39■■■□□ 2.62
SCARB2-212ENST00000638663 TONSLQ96HA7 1378 aa31.38■■■□□ 2.61
SCARB2-212ENST00000638663 DUOX2Q9NRD8 1548 aa31.38■■■□□ 2.61
SCARB2-212ENST00000638663 RTEL1-TNFRSF6BF6WH68 1400 aa31.37■■■□□ 2.61
SCARB2-212ENST00000638663 ZFYVE16Q7Z3T8 1539 aa31.36■■■□□ 2.61
SCARB2-212ENST00000638663 CFAP74Q9C0B2 1584 aa31.36■■■□□ 2.61
SCARB2-212ENST00000638663 ANKRD30BQ9BXX2 1392 aa31.35■■■□□ 2.61
SCARB2-212ENST00000638663 KDM5DQ9BY66 1539 aa31.35■■■□□ 2.61
SCARB2-212ENST00000638663 PKD2Q13563 968 aa31.32■■■□□ 2.6
SCARB2-212ENST00000638663 ERBINQ96RT1 1412 aa31.3■■■□□ 2.6
SCARB2-212ENST00000638663 ATP7AQ04656 1500 aa31.3■■■□□ 2.6
SCARB2-212ENST00000638663 INO80Q9ULG1 1556 aaPredicted RBP31.3■■■□□ 2.6
SCARB2-212ENST00000638663 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
SCARB2-212ENST00000638663 GLI2P10070 1586 aa31.28■■■□□ 2.6
SCARB2-212ENST00000638663 MAP3K4Q9Y6R4 1608 aa31.28■■■□□ 2.6
SCARB2-212ENST00000638663 MYT1LQ9UL68 1186 aa31.28■■■□□ 2.6
SCARB2-212ENST00000638663 UNC13BO14795 1591 aa31.26■■■□□ 2.6
SCARB2-212ENST00000638663 ZNF518AQ6AHZ1 1483 aa31.25■■■□□ 2.59
SCARB2-212ENST00000638663 NEO1Q92859 1461 aa31.25■■■□□ 2.59
SCARB2-212ENST00000638663 FAM69CQ0P6D2 419 aa31.24■■■□□ 2.59
SCARB2-212ENST00000638663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.24■■■□□ 2.59
SCARB2-212ENST00000638663 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
SCARB2-212ENST00000638663 POGZQ7Z3K3 1410 aa31.23■■■□□ 2.59
SCARB2-212ENST00000638663 DIP2BQ9P265 1576 aa31.22■■■□□ 2.59
SCARB2-212ENST00000638663 RPRD2Q5VT52 1461 aaKnown RBP31.21■■■□□ 2.59
SCARB2-212ENST00000638663 KIDINS220Q9ULH0 1771 aa31.17■■■□□ 2.58
SCARB2-212ENST00000638663 KDM5CP41229 1560 aa31.16■■■□□ 2.58
SCARB2-212ENST00000638663 MAGI2Q86UL8 1455 aa31.16■■■□□ 2.58
SCARB2-212ENST00000638663 IQGAP3Q86VI3 1631 aa31.14■■■□□ 2.58
SCARB2-212ENST00000638663 DIEXFQ68CQ4 756 aaKnown RBP31.12■■■□□ 2.57
SCARB2-212ENST00000638663 DHX29Q7Z478 1369 aaKnown RBP31.11■■■□□ 2.57
SCARB2-212ENST00000638663 RAPGEF3O95398 923 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms