RNA–Protein interactions for RNA: ENST00000638618.1

GFAP-229, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-229ENST00000638618 ARHGAP35Q9NRY4 1499 aa24.71■■□□□ 1.55
GFAP-229ENST00000638618 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
GFAP-229ENST00000638618 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
GFAP-229ENST00000638618 EFCAB2Q5VUJ9 269 aa24.68■■□□□ 1.54
GFAP-229ENST00000638618 SIGLEC1Q9BZZ2 1709 aa24.68■■□□□ 1.54
GFAP-229ENST00000638618 MYO5CQ9NQX4 1742 aa24.68■■□□□ 1.54
GFAP-229ENST00000638618 KIF14Q15058 1648 aa24.65■■□□□ 1.54
GFAP-229ENST00000638618 ATP10AO60312 1499 aa24.64■■□□□ 1.53
GFAP-229ENST00000638618 TROQ12816 1431 aaPredicted RBP24.63■■□□□ 1.53
GFAP-229ENST00000638618 MLECQ14165 292 aa24.63■■□□□ 1.53
GFAP-229ENST00000638618 PLPPR3Q6T4P5 718 aa24.63■■□□□ 1.53
GFAP-229ENST00000638618 CLIP1P30622 1438 aa24.62■■□□□ 1.53
GFAP-229ENST00000638618 C9orf84Q5VXU9 1444 aa24.62■■□□□ 1.53
GFAP-229ENST00000638618 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
GFAP-229ENST00000638618 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
GFAP-229ENST00000638618 HSPA2P54652 639 aa24.59■■□□□ 1.53
GFAP-229ENST00000638618 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
GFAP-229ENST00000638618 ARHGAP5Q13017 1502 aa24.59■■□□□ 1.53
GFAP-229ENST00000638618 ARHGEF12Q9NZN5 1544 aa24.59■■□□□ 1.53
GFAP-229ENST00000638618 KDM5CP41229 1560 aa24.54■■□□□ 1.52
GFAP-229ENST00000638618 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
GFAP-229ENST00000638618 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
GFAP-229ENST00000638618 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
GFAP-229ENST00000638618 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
GFAP-229ENST00000638618 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
GFAP-229ENST00000638618 PREX1Q8TCU6 1659 aa24.47■■□□□ 1.51
GFAP-229ENST00000638618 DIP2CQ9Y2E4 1556 aa24.47■■□□□ 1.51
GFAP-229ENST00000638618 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
GFAP-229ENST00000638618 PREX2Q70Z35 1606 aa24.46■■□□□ 1.51
GFAP-229ENST00000638618 MLH3Q9UHC1 1453 aa24.45■■□□□ 1.51
GFAP-229ENST00000638618 CDC42BPBQ9Y5S2 1711 aa24.45■■□□□ 1.5
GFAP-229ENST00000638618 CEBPAP49715 358 aaPredicted RBP24.43■■□□□ 1.5
GFAP-229ENST00000638618 ABCC1P33527 1531 aa24.43■■□□□ 1.5
GFAP-229ENST00000638618 ABCA6Q8N139 1617 aa24.42■■□□□ 1.5
GFAP-229ENST00000638618 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.5
GFAP-229ENST00000638618 CERKQ8TCT0 537 aa24.39■■□□□ 1.49
GFAP-229ENST00000638618 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
GFAP-229ENST00000638618 ITSN2Q9NZM3 1697 aa24.38■■□□□ 1.49
GFAP-229ENST00000638618 AGLP35573 1532 aa24.38■■□□□ 1.49
GFAP-229ENST00000638618 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
GFAP-229ENST00000638618 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
GFAP-229ENST00000638618 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
GFAP-229ENST00000638618 CDC42BPAQ5VT25 1732 aa24.33■■□□□ 1.49
GFAP-229ENST00000638618 C3P01024 1663 aa24.3■■□□□ 1.48
GFAP-229ENST00000638618 KIDINS220Q9ULH0 1771 aa24.3■■□□□ 1.48
GFAP-229ENST00000638618 CNTLNQ9NXG0 1405 aa24.28■■□□□ 1.48
GFAP-229ENST00000638618 STRCQ7RTU9 1775 aa24.28■■□□□ 1.48
GFAP-229ENST00000638618 SETD1BQ9UPS6 1966 aaKnown RBP24.27■■□□□ 1.48
GFAP-229ENST00000638618 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
GFAP-229ENST00000638618 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
GFAP-229ENST00000638618 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
GFAP-229ENST00000638618 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
GFAP-229ENST00000638618 PTPRTO14522 1441 aa24.22■■□□□ 1.47
GFAP-229ENST00000638618 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
GFAP-229ENST00000638618 PLEKHH2Q8IVE3 1493 aa24.21■■□□□ 1.47
GFAP-229ENST00000638618 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
GFAP-229ENST00000638618 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
GFAP-229ENST00000638618 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
GFAP-229ENST00000638618 MROH2AA6NES4 1674 aa24.18■■□□□ 1.46
GFAP-229ENST00000638618 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
GFAP-229ENST00000638618 NPATQ14207 1427 aa24.18■■□□□ 1.46
GFAP-229ENST00000638618 ATP7AQ04656 1500 aa24.17■■□□□ 1.46
GFAP-229ENST00000638618 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
GFAP-229ENST00000638618 INO80Q9ULG1 1556 aaPredicted RBP24.15■■□□□ 1.46
GFAP-229ENST00000638618 NCOA1Q15788 1441 aa24.14■■□□□ 1.45
GFAP-229ENST00000638618 ZMYM3Q14202 1370 aa24.13■■□□□ 1.45
GFAP-229ENST00000638618 A2MP01023 1474 aa24.13■■□□□ 1.45
GFAP-229ENST00000638618 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
GFAP-229ENST00000638618 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
GFAP-229ENST00000638618 CAMSAP1Q5T5Y3 1602 aa24.07■■□□□ 1.44
GFAP-229ENST00000638618 EHBP1L1Q8N3D4 1523 aa24.07■■□□□ 1.44
GFAP-229ENST00000638618 CLTCQ00610 1675 aaKnown RBP24.07■■□□□ 1.44
GFAP-229ENST00000638618 TIAM1Q13009 1591 aa24.06■■□□□ 1.44
GFAP-229ENST00000638618 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
GFAP-229ENST00000638618 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
GFAP-229ENST00000638618 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
GFAP-229ENST00000638618 GGT6Q6P531 493 aa24.03■■□□□ 1.44
GFAP-229ENST00000638618 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
GFAP-229ENST00000638618 MYO3AQ8NEV4 1616 aa24.02■■□□□ 1.44
GFAP-229ENST00000638618 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
GFAP-229ENST00000638618 ZNF644Q9H582 1327 aaPredicted RBP24.01■■□□□ 1.43
GFAP-229ENST00000638618 ZNF142P52746 1687 aaPredicted RBP24.01■■□□□ 1.43
GFAP-229ENST00000638618 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
GFAP-229ENST00000638618 MBD5Q9P267 1494 aa24■■□□□ 1.43
GFAP-229ENST00000638618 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
GFAP-229ENST00000638618 PLA2R1Q13018 1463 aa23.99■■□□□ 1.43
GFAP-229ENST00000638618 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
GFAP-229ENST00000638618 PKD2Q13563 968 aa23.97■■□□□ 1.43
GFAP-229ENST00000638618 NCKAP5LQ9HCH0 1330 aa23.97■■□□□ 1.43
GFAP-229ENST00000638618 DISP3Q9P2K9 1392 aa23.97■■□□□ 1.43
GFAP-229ENST00000638618 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
GFAP-229ENST00000638618 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
GFAP-229ENST00000638618 CCDC141Q6ZP82 1450 aa23.92■■□□□ 1.42
GFAP-229ENST00000638618 ZNF335Q9H4Z2 1342 aaPredicted RBP23.9■■□□□ 1.42
GFAP-229ENST00000638618 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
GFAP-229ENST00000638618 A2ML1A8K2U0 1454 aa23.89■■□□□ 1.42
GFAP-229ENST00000638618 FAM135AQ9P2D6 1515 aa23.89■■□□□ 1.41
GFAP-229ENST00000638618 CAMSAP2Q08AD1 1489 aa23.88■■□□□ 1.41
GFAP-229ENST00000638618 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
GFAP-229ENST00000638618 KIF3BO15066 747 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms