RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 NUP153P49790 1475 aaKnown RBP12.91□□□□□ -0.34
STRADA-228ENST00000638578 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
STRADA-228ENST00000638578 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
STRADA-228ENST00000638578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
STRADA-228ENST00000638578 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
STRADA-228ENST00000638578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
STRADA-228ENST00000638578 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
STRADA-228ENST00000638578 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
STRADA-228ENST00000638578 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
STRADA-228ENST00000638578 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
STRADA-228ENST00000638578 ARHGEF12Q9NZN5 1544 aa12.83□□□□□ -0.35
STRADA-228ENST00000638578 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
STRADA-228ENST00000638578 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
STRADA-228ENST00000638578 YEATS2Q9ULM3 1422 aa12.82□□□□□ -0.36
STRADA-228ENST00000638578 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
STRADA-228ENST00000638578 HSPA2P54652 639 aa12.82□□□□□ -0.36
STRADA-228ENST00000638578 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
STRADA-228ENST00000638578 KCNA4P22459 653 aa12.79□□□□□ -0.36
STRADA-228ENST00000638578 SPATA31D1Q6ZQQ2 1576 aa12.78□□□□□ -0.36
STRADA-228ENST00000638578 EEA1Q15075 1411 aa12.78□□□□□ -0.36
STRADA-228ENST00000638578 ATP10AO60312 1499 aa12.78□□□□□ -0.36
STRADA-228ENST00000638578 REREQ9P2R6 1566 aa12.77□□□□□ -0.37
STRADA-228ENST00000638578 C3P01024 1663 aa12.77□□□□□ -0.37
STRADA-228ENST00000638578 PLCH2O75038 1416 aa12.76□□□□□ -0.37
STRADA-228ENST00000638578 SCAPERQ9BY12 1400 aa12.76□□□□□ -0.37
STRADA-228ENST00000638578 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
STRADA-228ENST00000638578 KDM5CP41229 1560 aa12.76□□□□□ -0.37
STRADA-228ENST00000638578 KIF14Q15058 1648 aa12.75□□□□□ -0.37
STRADA-228ENST00000638578 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
STRADA-228ENST00000638578 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
STRADA-228ENST00000638578 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
STRADA-228ENST00000638578 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
STRADA-228ENST00000638578 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
STRADA-228ENST00000638578 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
STRADA-228ENST00000638578 SOCS7O14512 581 aa12.72□□□□□ -0.37
STRADA-228ENST00000638578 MLECQ14165 292 aa12.72□□□□□ -0.37
STRADA-228ENST00000638578 CDC42BPBQ9Y5S2 1711 aa12.71□□□□□ -0.38
STRADA-228ENST00000638578 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
STRADA-228ENST00000638578 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
STRADA-228ENST00000638578 RNF216Q9NWF9 866 aaPredicted RBP12.7□□□□□ -0.38
STRADA-228ENST00000638578 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
STRADA-228ENST00000638578 PTPRTO14522 1441 aa12.7□□□□□ -0.38
STRADA-228ENST00000638578 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
STRADA-228ENST00000638578 ITSN2Q9NZM3 1697 aa12.69□□□□□ -0.38
STRADA-228ENST00000638578 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
STRADA-228ENST00000638578 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
STRADA-228ENST00000638578 PREX2Q70Z35 1606 aa12.68□□□□□ -0.38
STRADA-228ENST00000638578 AGLP35573 1532 aa12.67□□□□□ -0.38
STRADA-228ENST00000638578 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
STRADA-228ENST00000638578 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
STRADA-228ENST00000638578 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
STRADA-228ENST00000638578 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
STRADA-228ENST00000638578 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
STRADA-228ENST00000638578 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
STRADA-228ENST00000638578 CLIP1P30622 1438 aa12.65□□□□□ -0.38
STRADA-228ENST00000638578 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
STRADA-228ENST00000638578 ZNF142P52746 1687 aaPredicted RBP12.64□□□□□ -0.39
STRADA-228ENST00000638578 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
STRADA-228ENST00000638578 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
STRADA-228ENST00000638578 ABCC1P33527 1531 aa12.63□□□□□ -0.39
STRADA-228ENST00000638578 CDC42BPAQ5VT25 1732 aa12.63□□□□□ -0.39
STRADA-228ENST00000638578 CEBPAP49715 358 aaPredicted RBP12.63□□□□□ -0.39
STRADA-228ENST00000638578 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
STRADA-228ENST00000638578 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
STRADA-228ENST00000638578 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
STRADA-228ENST00000638578 TRAPPC8Q9Y2L5 1435 aa12.61□□□□□ -0.39
STRADA-228ENST00000638578 CAMSAP1Q5T5Y3 1602 aa12.6□□□□□ -0.39
STRADA-228ENST00000638578 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
STRADA-228ENST00000638578 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
STRADA-228ENST00000638578 NPATQ14207 1427 aa12.58□□□□□ -0.4
STRADA-228ENST00000638578 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
STRADA-228ENST00000638578 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
STRADA-228ENST00000638578 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
STRADA-228ENST00000638578 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
STRADA-228ENST00000638578 CCDC18Q5T9S5 1454 aa12.56□□□□□ -0.4
STRADA-228ENST00000638578 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
STRADA-228ENST00000638578 ATP1B4Q9UN42 357 aaPredicted RBP12.55□□□□□ -0.4
STRADA-228ENST00000638578 SAMD9LQ8IVG5 1584 aa12.55□□□□□ -0.4
STRADA-228ENST00000638578 PLA2R1Q13018 1463 aa12.54□□□□□ -0.4
STRADA-228ENST00000638578 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
STRADA-228ENST00000638578 ADGBQ8N7X0 1667 aa12.53□□□□□ -0.4
STRADA-228ENST00000638578 PLXNC1O60486 1568 aa12.52□□□□□ -0.4
STRADA-228ENST00000638578 INO80Q9ULG1 1556 aaPredicted RBP12.52□□□□□ -0.4
STRADA-228ENST00000638578 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
STRADA-228ENST00000638578 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
STRADA-228ENST00000638578 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
STRADA-228ENST00000638578 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
STRADA-228ENST00000638578 CASKIN1Q8WXD9 1431 aa12.47□□□□□ -0.41
STRADA-228ENST00000638578 PKD2Q13563 968 aa12.47□□□□□ -0.41
STRADA-228ENST00000638578 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
STRADA-228ENST00000638578 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
STRADA-228ENST00000638578 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
STRADA-228ENST00000638578 PLEKHH2Q8IVE3 1493 aa12.46□□□□□ -0.42
STRADA-228ENST00000638578 FYCO1Q9BQS8 1478 aa12.46□□□□□ -0.42
STRADA-228ENST00000638578 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
STRADA-228ENST00000638578 ZNF335Q9H4Z2 1342 aaPredicted RBP12.45□□□□□ -0.42
STRADA-228ENST00000638578 CPS1P31327 1500 aa12.45□□□□□ -0.42
STRADA-228ENST00000638578 A2MP01023 1474 aa12.44□□□□□ -0.42
STRADA-228ENST00000638578 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
STRADA-228ENST00000638578 A2ML1A8K2U0 1454 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms