RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 ZNF644Q9H582 1327 aaPredicted RBP14.69□□□□□ -0.06
ATM-226ENST00000638443 ADCY10Q96PN6 1610 aa14.68□□□□□ -0.06
ATM-226ENST00000638443 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
ATM-226ENST00000638443 ABCC2Q92887 1545 aa14.66□□□□□ -0.06
ATM-226ENST00000638443 MIA2Q96PC5 1412 aa14.66□□□□□ -0.06
ATM-226ENST00000638443 CHIC2Q9UKJ5 165 aa14.66□□□□□ -0.06
ATM-226ENST00000638443 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
ATM-226ENST00000638443 HOMEZQ8IX15 550 aa14.65□□□□□ -0.06
ATM-226ENST00000638443 PLEKHD1A6NEE1 506 aa14.64□□□□□ -0.07
ATM-226ENST00000638443 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
ATM-226ENST00000638443 MAPKBP1O60336 1514 aa14.62□□□□□ -0.07
ATM-226ENST00000638443 HFM1A2PYH4 1435 aa14.62□□□□□ -0.07
ATM-226ENST00000638443 PLCB2Q00722 1185 aa14.62□□□□□ -0.07
ATM-226ENST00000638443 CAMSAP2Q08AD1 1489 aa14.62□□□□□ -0.07
ATM-226ENST00000638443 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
ATM-226ENST00000638443 NAIPQ13075 1403 aa14.61□□□□□ -0.07
ATM-226ENST00000638443 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
ATM-226ENST00000638443 RRP7BPQ9NSQ0 103 aa14.61□□□□□ -0.07
ATM-226ENST00000638443 ZNF777Q9ULD5 760 aaPredicted RBP14.61□□□□□ -0.07
ATM-226ENST00000638443 CFDP1Q9UEE9 299 aaPredicted RBP14.6□□□□□ -0.07
ATM-226ENST00000638443 DAPK1P53355 1430 aa14.6□□□□□ -0.07
ATM-226ENST00000638443 ZCCHC11Q5TAX3 1644 aaKnown RBP14.59□□□□□ -0.07
ATM-226ENST00000638443 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
ATM-226ENST00000638443 KDM6BO15054 1643 aa14.58□□□□□ -0.07
ATM-226ENST00000638443 ABCC5O15440 1437 aa14.58□□□□□ -0.08
ATM-226ENST00000638443 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
ATM-226ENST00000638443 TTC37Q6PGP7 1564 aa14.58□□□□□ -0.08
ATM-226ENST00000638443 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
ATM-226ENST00000638443 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
ATM-226ENST00000638443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.55□□□□□ -0.08
ATM-226ENST00000638443 KDM5BQ9UGL1 1544 aa14.55□□□□□ -0.08
ATM-226ENST00000638443 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
ATM-226ENST00000638443 ZBTB22O15209 634 aa14.53□□□□□ -0.08
ATM-226ENST00000638443 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
ATM-226ENST00000638443 CLSPNQ9HAW4 1339 aa14.53□□□□□ -0.08
ATM-226ENST00000638443 CDC42BPBQ9Y5S2 1711 aa14.52□□□□□ -0.08
ATM-226ENST00000638443 PREX2Q70Z35 1606 aa14.52□□□□□ -0.08
ATM-226ENST00000638443 CROCC2H7BZ55 1655 aa14.51□□□□□ -0.09
ATM-226ENST00000638443 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
ATM-226ENST00000638443 AKNAQ7Z591 1439 aa14.51□□□□□ -0.09
ATM-226ENST00000638443 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
ATM-226ENST00000638443 ARHGAP5Q13017 1502 aa14.47□□□□□ -0.09
ATM-226ENST00000638443 HNRNPMP52272 730 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATM-226ENST00000638443 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
ATM-226ENST00000638443 DENND4BO75064 1496 aaPredicted RBP14.47□□□□□ -0.09
ATM-226ENST00000638443 MYT1Q01538 1121 aa14.46□□□□□ -0.09
ATM-226ENST00000638443 MYO5CQ9NQX4 1742 aa14.46□□□□□ -0.1
ATM-226ENST00000638443 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.1
ATM-226ENST00000638443 ADGBQ8N7X0 1667 aa14.46□□□□□ -0.1
ATM-226ENST00000638443 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
ATM-226ENST00000638443 GTF3C3Q9Y5Q9 886 aa14.45□□□□□ -0.1
ATM-226ENST00000638443 MBD5Q9P267 1494 aa14.45□□□□□ -0.1
ATM-226ENST00000638443 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
ATM-226ENST00000638443 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
ATM-226ENST00000638443 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
ATM-226ENST00000638443 WDR7Q9Y4E6 1490 aa14.43□□□□□ -0.1
ATM-226ENST00000638443 C9orf84Q5VXU9 1444 aa14.43□□□□□ -0.1
ATM-226ENST00000638443 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
ATM-226ENST00000638443 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
ATM-226ENST00000638443 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
ATM-226ENST00000638443 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
ATM-226ENST00000638443 SHANK2Q9UPX8 1470 aa14.4□□□□□ -0.1
ATM-226ENST00000638443 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
ATM-226ENST00000638443 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
ATM-226ENST00000638443 PLCH2O75038 1416 aa14.39□□□□□ -0.11
ATM-226ENST00000638443 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
ATM-226ENST00000638443 PODXL2Q9NZ53 605 aa14.37□□□□□ -0.11
ATM-226ENST00000638443 MPHOSPH9Q99550 1183 aa14.36□□□□□ -0.11
ATM-226ENST00000638443 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
ATM-226ENST00000638443 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
ATM-226ENST00000638443 TSPY4P0CV99 314 aa14.35□□□□□ -0.11
ATM-226ENST00000638443 TSPY10P0CW01 314 aa14.35□□□□□ -0.11
ATM-226ENST00000638443 ABCC1P33527 1531 aa14.35□□□□□ -0.11
ATM-226ENST00000638443 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
ATM-226ENST00000638443 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
ATM-226ENST00000638443 PZPP20742 1482 aa14.34□□□□□ -0.11
ATM-226ENST00000638443 ABCA9Q8IUA7 1624 aa14.34□□□□□ -0.11
ATM-226ENST00000638443 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
ATM-226ENST00000638443 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
ATM-226ENST00000638443 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
ATM-226ENST00000638443 TRAPPC8Q9Y2L5 1435 aa14.33□□□□□ -0.12
ATM-226ENST00000638443 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
ATM-226ENST00000638443 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
ATM-226ENST00000638443 CYB5RLQ6IPT4 315 aa14.31□□□□□ -0.12
ATM-226ENST00000638443 FANCAO15360 1455 aa14.3□□□□□ -0.12
ATM-226ENST00000638443 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATM-226ENST00000638443 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
ATM-226ENST00000638443 MAST1Q9Y2H9 1570 aa14.29□□□□□ -0.12
ATM-226ENST00000638443 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
ATM-226ENST00000638443 ARAP3Q8WWN8 1544 aa14.28□□□□□ -0.12
ATM-226ENST00000638443 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.12
ATM-226ENST00000638443 AFAP1Q8N556 730 aa14.27□□□□□ -0.12
ATM-226ENST00000638443 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
ATM-226ENST00000638443 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
ATM-226ENST00000638443 NUP155O75694 1391 aa14.25□□□□□ -0.13
ATM-226ENST00000638443 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
ATM-226ENST00000638443 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
ATM-226ENST00000638443 ZFYVE16Q7Z3T8 1539 aa14.24□□□□□ -0.13
ATM-226ENST00000638443 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
ATM-226ENST00000638443 PKD2Q13563 968 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms