RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 CCDC88BA6NC98 1476 aa6.79□□□□□ -1.32
GABRA1-220ENST00000638159 ZNF335Q9H4Z2 1342 aaPredicted RBP6.78□□□□□ -1.32
GABRA1-220ENST00000638159 GOLGA3Q08378 1498 aa6.77□□□□□ -1.32
GABRA1-220ENST00000638159 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
GABRA1-220ENST00000638159 WASHC2CQ9Y4E1 1318 aa6.77□□□□□ -1.33
GABRA1-220ENST00000638159 CAPN15O75808 1086 aa6.76□□□□□ -1.33
GABRA1-220ENST00000638159 SPAG9O60271 1321 aaKnown RBP6.76□□□□□ -1.33
GABRA1-220ENST00000638159 C8orf37Q96NL8 207 aa6.76□□□□□ -1.33
GABRA1-220ENST00000638159 TSPOAP1O95153 1857 aa6.76□□□□□ -1.33
GABRA1-220ENST00000638159 CHD1O14646 1710 aa6.75□□□□□ -1.33
GABRA1-220ENST00000638159 CEP170Q5SW79 1584 aa6.75□□□□□ -1.33
GABRA1-220ENST00000638159 PTPRTO14522 1441 aa6.74□□□□□ -1.33
GABRA1-220ENST00000638159 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
GABRA1-220ENST00000638159 ABCC2Q92887 1545 aa6.74□□□□□ -1.33
GABRA1-220ENST00000638159 KIAA0586Q9BVV6 1533 aa6.74□□□□□ -1.33
GABRA1-220ENST00000638159 TXNDC2Q86VQ3 553 aa6.74□□□□□ -1.33
GABRA1-220ENST00000638159 WDR7Q9Y4E6 1490 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 MSH6P52701 1360 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 CCDC125Q86Z20 511 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 CFAP44Q96MT7 982 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 CLIP1P30622 1438 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 WIZO95785 1651 aa6.73□□□□□ -1.33
GABRA1-220ENST00000638159 RBM6P78332 1123 aaKnown RBP6.72□□□□□ -1.33
GABRA1-220ENST00000638159 PCF11O94913 1555 aaKnown RBP6.72□□□□□ -1.33
GABRA1-220ENST00000638159 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
GABRA1-220ENST00000638159 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
GABRA1-220ENST00000638159 ATAD2Q6PL18 1390 aa6.72□□□□□ -1.33
GABRA1-220ENST00000638159 NUP160Q12769 1436 aa6.7□□□□□ -1.34
GABRA1-220ENST00000638159 CNTLNQ9NXG0 1405 aa6.7□□□□□ -1.34
GABRA1-220ENST00000638159 KIF3BO15066 747 aa6.7□□□□□ -1.34
GABRA1-220ENST00000638159 CFDP1Q9UEE9 299 aaPredicted RBP6.7□□□□□ -1.34
GABRA1-220ENST00000638159 CADPS2Q86UW7 1296 aa6.7□□□□□ -1.34
GABRA1-220ENST00000638159 GPR162Q16538 588 aa6.69□□□□□ -1.34
GABRA1-220ENST00000638159 MAPKBP1O60336 1514 aa6.69□□□□□ -1.34
GABRA1-220ENST00000638159 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
GABRA1-220ENST00000638159 SCAPERQ9BY12 1400 aa6.69□□□□□ -1.34
GABRA1-220ENST00000638159 GIGYF1O75420 1035 aaPredicted RBP6.68□□□□□ -1.34
GABRA1-220ENST00000638159 CLASP1Q7Z460 1538 aa6.68□□□□□ -1.34
GABRA1-220ENST00000638159 UPF1Q92900 1129 aaKnown RBP eCLIP6.67□□□□□ -1.34
GABRA1-220ENST00000638159 TRAPPC8Q9Y2L5 1435 aa6.67□□□□□ -1.34
GABRA1-220ENST00000638159 ZNF326Q5BKZ1 582 aaKnown RBP6.66□□□□□ -1.34
GABRA1-220ENST00000638159 LRRC59Q96AG4 307 aaKnown RBP6.66□□□□□ -1.34
GABRA1-220ENST00000638159 JCADQ9P266 1359 aa6.66□□□□□ -1.34
GABRA1-220ENST00000638159 KANK1Q14678 1352 aa6.66□□□□□ -1.34
GABRA1-220ENST00000638159 MSH5O43196 834 aa6.66□□□□□ -1.34
GABRA1-220ENST00000638159 CFAP43Q8NDM7 1665 aa6.66□□□□□ -1.34
GABRA1-220ENST00000638159 ABCA10Q8WWZ4 1543 aa6.65□□□□□ -1.34
GABRA1-220ENST00000638159 USP21Q9UK80 565 aa6.65□□□□□ -1.35
GABRA1-220ENST00000638159 EPRSP07814 1512 aaKnown RBP6.64□□□□□ -1.35
GABRA1-220ENST00000638159 PDE3BQ13370 1112 aa6.64□□□□□ -1.35
GABRA1-220ENST00000638159 AFAP1Q8N556 730 aa6.64□□□□□ -1.35
GABRA1-220ENST00000638159 SPATA31A6Q5VVP1 1343 aa6.64□□□□□ -1.35
GABRA1-220ENST00000638159 SPON1Q9HCB6 807 aa6.63□□□□□ -1.35
GABRA1-220ENST00000638159 FAM135AQ9P2D6 1515 aa6.63□□□□□ -1.35
GABRA1-220ENST00000638159 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
GABRA1-220ENST00000638159 PSDA5PKW4 1024 aaPredicted RBP6.62□□□□□ -1.35
GABRA1-220ENST00000638159 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 AFF2P51816 1311 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 POLD1P28340 1107 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 EVA1CP58658 441 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 IFFO2Q5TF58 517 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 BCL11BQ9C0K0 894 aaPredicted RBP6.62□□□□□ -1.35
GABRA1-220ENST00000638159 DIP2BQ9P265 1576 aa6.62□□□□□ -1.35
GABRA1-220ENST00000638159 NEO1Q92859 1461 aa6.61□□□□□ -1.35
GABRA1-220ENST00000638159 HMGB2P26583 209 aaKnown RBP6.61□□□□□ -1.35
GABRA1-220ENST00000638159 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.61□□□□□ -1.35
GABRA1-220ENST00000638159 TNRQ92752 1358 aa6.61□□□□□ -1.35
GABRA1-220ENST00000638159 C9orf84Q5VXU9 1444 aa6.6□□□□□ -1.35
GABRA1-220ENST00000638159 CSRNP3Q8WYN3 585 aa6.6□□□□□ -1.35
GABRA1-220ENST00000638159 SLAIN2Q9P270 581 aa6.6□□□□□ -1.35
GABRA1-220ENST00000638159 ATP10AO60312 1499 aa6.59□□□□□ -1.35
GABRA1-220ENST00000638159 KIF21BO75037 1637 aa6.59□□□□□ -1.35
GABRA1-220ENST00000638159 IQSEC2Q5JU85 1478 aa6.59□□□□□ -1.35
GABRA1-220ENST00000638159 TNS4Q8IZW8 715 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 AIDAQ96BJ3 306 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 MAGI3Q5TCQ9 1506 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 SLC26A8Q96RN1 970 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 BEGAINQ9BUH8 593 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 EFCAB5A4FU69 1503 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 ERICH3Q5RHP9 1530 aa6.58□□□□□ -1.36
GABRA1-220ENST00000638159 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
GABRA1-220ENST00000638159 ZMYM3Q14202 1370 aa6.56□□□□□ -1.36
GABRA1-220ENST00000638159 MTUS2Q5JR59 1369 aa6.56□□□□□ -1.36
GABRA1-220ENST00000638159 ZFYVE16Q7Z3T8 1539 aa6.56□□□□□ -1.36
GABRA1-220ENST00000638159 R3HDM1Q15032 1099 aaKnown RBP6.55□□□□□ -1.36
GABRA1-220ENST00000638159 GPBP1L1Q9HC44 474 aaPredicted RBP6.55□□□□□ -1.36
GABRA1-220ENST00000638159 STK32BQ9NY57 414 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 CCNB3Q8WWL7 1395 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 RSPH4AQ5TD94 716 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 MAGI2Q86UL8 1455 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 PSME1Q06323 249 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 RAPGEF2Q9Y4G8 1499 aa6.55□□□□□ -1.36
GABRA1-220ENST00000638159 IGF1RP08069 1367 aa6.54□□□□□ -1.36
GABRA1-220ENST00000638159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.54□□□□□ -1.36
GABRA1-220ENST00000638159 NPM2Q86SE8 214 aaKnown RBP6.54□□□□□ -1.36
GABRA1-220ENST00000638159 KCNA6P17658 529 aa6.53□□□□□ -1.36
GABRA1-220ENST00000638159 SLC4A1APQ9BWU0 796 aaKnown RBP6.53□□□□□ -1.36
GABRA1-220ENST00000638159 C19orf44Q9H6X5 657 aa6.53□□□□□ -1.36
GABRA1-220ENST00000638159 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
GABRA1-220ENST00000638159 KIAA0556O60303 1618 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms