RNA–Protein interactions for RNA: ENST00000637798.1

KCNT1-225, Transcript of potassium sodium-activated channel subfamily T member 1, human

TSL 5

Gene KCNT1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNT1-225	ENST00000637798	KDM5C	P41229	1560 aa		5.13	□□□□□ -1.59
KCNT1-225	ENST00000637798	MED1	Q15648	1581 aa	Predicted RBP	5.13	□□□□□ -1.59
KCNT1-225	ENST00000637798	UHRF1BP1	Q6BDS2	1440 aa		5.12	□□□□□ -1.59
KCNT1-225	ENST00000637798	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
KCNT1-225	ENST00000637798	HSPA2	P54652	639 aa		5.11	□□□□□ -1.59
KCNT1-225	ENST00000637798	ATP10A	O60312	1499 aa		5.11	□□□□□ -1.59
KCNT1-225	ENST00000637798	NCOA1	Q15788	1441 aa		5.1	□□□□□ -1.59
KCNT1-225	ENST00000637798	C9orf84	Q5VXU9	1444 aa		5.1	□□□□□ -1.59
KCNT1-225	ENST00000637798	CDC42BPB	Q9Y5S2	1711 aa		5.1	□□□□□ -1.59
KCNT1-225	ENST00000637798	DIP2C	Q9Y2E4	1556 aa		5.09	□□□□□ -1.59
KCNT1-225	ENST00000637798	PLA2R1	Q13018	1463 aa		5.09	□□□□□ -1.59
KCNT1-225	ENST00000637798	RAPGEF3	O95398	923 aa		5.09	□□□□□ -1.59
KCNT1-225	ENST00000637798	KCNH8	Q96L42	1107 aa		5.09	□□□□□ -1.59
KCNT1-225	ENST00000637798	KIDINS220	Q9ULH0	1771 aa		5.09	□□□□□ -1.6
KCNT1-225	ENST00000637798	ITSN2	Q9NZM3	1697 aa		5.08	□□□□□ -1.6
KCNT1-225	ENST00000637798	PRX	Q9BXM0	1461 aa		5.08	□□□□□ -1.6
KCNT1-225	ENST00000637798	CAMSAP1	Q5T5Y3	1602 aa		5.08	□□□□□ -1.6
KCNT1-225	ENST00000637798	ABCA6	Q8N139	1617 aa		5.08	□□□□□ -1.6
KCNT1-225	ENST00000637798	MYO3A	Q8NEV4	1616 aa		5.08	□□□□□ -1.6
KCNT1-225	ENST00000637798	NUP153	P49790	1475 aa	Known RBP	5.07	□□□□□ -1.6
KCNT1-225	ENST00000637798	NPAT	Q14207	1427 aa		5.07	□□□□□ -1.6
KCNT1-225	ENST00000637798	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.07	□□□□□ -1.6
KCNT1-225	ENST00000637798	TCOF1	Q13428	1488 aa	Known RBP	5.07	□□□□□ -1.6
KCNT1-225	ENST00000637798	ZNF518A	Q6AHZ1	1483 aa		5.07	□□□□□ -1.6
KCNT1-225	ENST00000637798	CNTLN	Q9NXG0	1405 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	TRAPPC8	Q9Y2L5	1435 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	TTBK1	Q5TCY1	1321 aa	Predicted RBP	5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	CPS1	P31327	1500 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	XIRP1	Q702N8	1843 aa	Known RBP	5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	MLH3	Q9UHC1	1453 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	LRRIQ1	Q96JM4	1722 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	PLCH2	O75038	1416 aa		5.06	□□□□□ -1.6
KCNT1-225	ENST00000637798	DEPDC5	O75140	1603 aa		5.05	□□□□□ -1.6
KCNT1-225	ENST00000637798	PREX2	Q70Z35	1606 aa		5.05	□□□□□ -1.6
KCNT1-225	ENST00000637798	ALK	Q9UM73	1620 aa		5.05	□□□□□ -1.6
KCNT1-225	ENST00000637798	CDC42BPA	Q5VT25	1732 aa		5.05	□□□□□ -1.6
KCNT1-225	ENST00000637798	CLTC	Q00610	1675 aa	Known RBP	5.05	□□□□□ -1.6
KCNT1-225	ENST00000637798	SYNM	O15061	1565 aa		5.04	□□□□□ -1.6
KCNT1-225	ENST00000637798	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.04	□□□□□ -1.6
KCNT1-225	ENST00000637798	ADGB	Q8N7X0	1667 aa		5.04	□□□□□ -1.6
KCNT1-225	ENST00000637798	STRCP1	A6NGW2	1772 aa		5.04	□□□□□ -1.6
KCNT1-225	ENST00000637798	FAM135A	Q9P2D6	1515 aa		5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	DNMT1	P26358	1616 aa	Known RBP	5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	KIF14	Q15058	1648 aa		5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	RNF17	Q9BXT8	1623 aa	Known RBP	5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	SCAPER	Q9BY12	1400 aa		5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	NEURL4	Q96JN8	1562 aa		5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	SETD1A	O15047	1707 aa	Known RBP	5.03	□□□□□ -1.6
KCNT1-225	ENST00000637798	PLXNC1	O60486	1568 aa		5.02	□□□□□ -1.61
KCNT1-225	ENST00000637798	ABCC1	P33527	1531 aa		5.02	□□□□□ -1.61
KCNT1-225	ENST00000637798	PKD2	Q13563	968 aa		5.01	□□□□□ -1.61
KCNT1-225	ENST00000637798	ZC3H13	Q5T200	1668 aa	Known RBP	5.01	□□□□□ -1.61
KCNT1-225	ENST00000637798	VWDE	Q8N2E2	1590 aa		5	□□□□□ -1.61
KCNT1-225	ENST00000637798	PTPRK	Q15262	1439 aa		5	□□□□□ -1.61
KCNT1-225	ENST00000637798	IQGAP1	P46940	1657 aa		5	□□□□□ -1.61
KCNT1-225	ENST00000637798	PLEKHD1	A6NEE1	506 aa		5	□□□□□ -1.61
KCNT1-225	ENST00000637798	INO80	Q9ULG1	1556 aa	Predicted RBP	4.99	□□□□□ -1.61
KCNT1-225	ENST00000637798	MED14	O60244	1454 aa		4.99	□□□□□ -1.61
KCNT1-225	ENST00000637798	UBAP1L	F5GYI3	381 aa		4.98	□□□□□ -1.61
KCNT1-225	ENST00000637798	CEBPA	P49715	358 aa	Predicted RBP	4.98	□□□□□ -1.61
KCNT1-225	ENST00000637798	A2ML1	A8K2U0	1454 aa		4.98	□□□□□ -1.61
KCNT1-225	ENST00000637798	SHANK2	Q9UPX8	1470 aa		4.98	□□□□□ -1.61
KCNT1-225	ENST00000637798	KDM5A	P29375	1690 aa	Known RBP	4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	SAMD9L	Q8IVG5	1584 aa		4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	SUPT5H	O00267	1087 aa	Known RBP	4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	TOM1	O60784	492 aa		4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	EFCAB2	Q5VUJ9	269 aa		4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	ARHGAP5	Q13017	1502 aa		4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	CDK13	Q14004	1512 aa	Known RBP	4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.97	□□□□□ -1.61
KCNT1-225	ENST00000637798	PPP6R1	Q9UPN7	881 aa		4.96	□□□□□ -1.62
KCNT1-225	ENST00000637798	ZMYM3	Q14202	1370 aa		4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	HSPA1L	P34931	641 aa		4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	MLEC	Q14165	292 aa		4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	ATP7A	Q04656	1500 aa		4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	TRO	Q12816	1431 aa	Predicted RBP	4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	CFAP65	Q6ZU64	1925 aa	Known RBP	4.95	□□□□□ -1.62
KCNT1-225	ENST00000637798	UBR1	Q8IWV7	1749 aa		4.94	□□□□□ -1.62
KCNT1-225	ENST00000637798	SHPRH	Q149N8	1683 aa		4.93	□□□□□ -1.62
KCNT1-225	ENST00000637798	EEA1	Q15075	1411 aa		4.93	□□□□□ -1.62
KCNT1-225	ENST00000637798	FMN1	Q68DA7	1419 aa		4.93	□□□□□ -1.62
KCNT1-225	ENST00000637798	NLRP1	Q9C000	1473 aa		4.93	□□□□□ -1.62
KCNT1-225	ENST00000637798	ROBO1	Q9Y6N7	1651 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	LRRC7	Q96NW7	1537 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	PHLPP1	O60346	1717 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	CLIP1	P30622	1438 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	PHF23	Q9BUL5	403 aa	Predicted RBP	4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	ESF1	Q9H501	851 aa	Known RBP	4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	RGS17	Q9UGC6	210 aa	Predicted RBP	4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	PZP	P20742	1482 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	CHD2	O14647	1828 aa	Known RBP	4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	NCKAP5L	Q9HCH0	1330 aa		4.92	□□□□□ -1.62
KCNT1-225	ENST00000637798	KIAA1107	Q9UPP5	1409 aa		4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	PLPPR3	Q6T4P5	718 aa		4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	A2M	P01023	1474 aa		4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	PLEKHH2	Q8IVE3	1493 aa		4.91	□□□□□ -1.62
KCNT1-225	ENST00000637798	KDM5D	Q9BY66	1539 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms