RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 GPATCH8Q9UKJ3 1502 aaKnown RBP22.14■■□□□ 1.14
SCN8A-214ENST00000637709 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.13
SCN8A-214ENST00000637709 CAMSAP2Q08AD1 1489 aa22.13■■□□□ 1.13
SCN8A-214ENST00000637709 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
SCN8A-214ENST00000637709 DENND4BO75064 1496 aaPredicted RBP22.1■■□□□ 1.13
SCN8A-214ENST00000637709 TONSLQ96HA7 1378 aa22.09■■□□□ 1.13
SCN8A-214ENST00000637709 CDC42BPAQ5VT25 1732 aa22.07■■□□□ 1.12
SCN8A-214ENST00000637709 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
SCN8A-214ENST00000637709 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
SCN8A-214ENST00000637709 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
SCN8A-214ENST00000637709 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
SCN8A-214ENST00000637709 ADCY10Q96PN6 1610 aa22.05■■□□□ 1.12
SCN8A-214ENST00000637709 KCNH8Q96L42 1107 aa22.04■■□□□ 1.12
SCN8A-214ENST00000637709 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.12
SCN8A-214ENST00000637709 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
SCN8A-214ENST00000637709 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
SCN8A-214ENST00000637709 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
SCN8A-214ENST00000637709 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
SCN8A-214ENST00000637709 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
SCN8A-214ENST00000637709 SLC4A1APQ9BWU0 796 aaKnown RBP21.98■■□□□ 1.11
SCN8A-214ENST00000637709 ROCK1Q13464 1354 aa21.95■■□□□ 1.11
SCN8A-214ENST00000637709 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
SCN8A-214ENST00000637709 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
SCN8A-214ENST00000637709 CDC42BPBQ9Y5S2 1711 aa21.91■■□□□ 1.1
SCN8A-214ENST00000637709 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
SCN8A-214ENST00000637709 TIMELESSQ9UNS1 1208 aa21.9■■□□□ 1.1
SCN8A-214ENST00000637709 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
SCN8A-214ENST00000637709 ADGBQ8N7X0 1667 aa21.9■■□□□ 1.1
SCN8A-214ENST00000637709 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
SCN8A-214ENST00000637709 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.1
SCN8A-214ENST00000637709 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
SCN8A-214ENST00000637709 ABCC2Q92887 1545 aa21.88■■□□□ 1.09
SCN8A-214ENST00000637709 C9orf84Q5VXU9 1444 aa21.87■■□□□ 1.09
SCN8A-214ENST00000637709 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
SCN8A-214ENST00000637709 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
SCN8A-214ENST00000637709 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
SCN8A-214ENST00000637709 SAMD9LQ8IVG5 1584 aa21.86■■□□□ 1.09
SCN8A-214ENST00000637709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
SCN8A-214ENST00000637709 PZPP20742 1482 aa21.84■■□□□ 1.09
SCN8A-214ENST00000637709 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
SCN8A-214ENST00000637709 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.09
SCN8A-214ENST00000637709 PKD2Q13563 968 aa21.82■■□□□ 1.08
SCN8A-214ENST00000637709 ANKRD30BQ9BXX2 1392 aa21.82■■□□□ 1.08
SCN8A-214ENST00000637709 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
SCN8A-214ENST00000637709 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
SCN8A-214ENST00000637709 GTF3C3Q9Y5Q9 886 aa21.81■■□□□ 1.08
SCN8A-214ENST00000637709 SYCP2Q9BX26 1530 aa21.81■■□□□ 1.08
SCN8A-214ENST00000637709 MBD5Q9P267 1494 aa21.8■■□□□ 1.08
SCN8A-214ENST00000637709 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
SCN8A-214ENST00000637709 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
SCN8A-214ENST00000637709 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
SCN8A-214ENST00000637709 NUP155O75694 1391 aa21.78■■□□□ 1.08
SCN8A-214ENST00000637709 NBPF8Q3BBV2 869 aa21.77■■□□□ 1.07
SCN8A-214ENST00000637709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCN8A-214ENST00000637709 MYO5CQ9NQX4 1742 aa21.74■■□□□ 1.07
SCN8A-214ENST00000637709 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
SCN8A-214ENST00000637709 RPRD2Q5VT52 1461 aaKnown RBP21.73■■□□□ 1.07
SCN8A-214ENST00000637709 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
SCN8A-214ENST00000637709 SHANK2Q9UPX8 1470 aa21.7■■□□□ 1.06
SCN8A-214ENST00000637709 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.06
SCN8A-214ENST00000637709 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
SCN8A-214ENST00000637709 ARHGEF5Q12774 1597 aa21.69■■□□□ 1.06
SCN8A-214ENST00000637709 KIAA1107Q9UPP5 1409 aa21.68■■□□□ 1.06
SCN8A-214ENST00000637709 C11orf95C9JLR9 678 aaPredicted RBP21.64■■□□□ 1.05
SCN8A-214ENST00000637709 AFAP1Q8N556 730 aa21.64■■□□□ 1.05
SCN8A-214ENST00000637709 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
SCN8A-214ENST00000637709 WASHC2AQ641Q2 1341 aa21.63■■□□□ 1.05
SCN8A-214ENST00000637709 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
SCN8A-214ENST00000637709 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
SCN8A-214ENST00000637709 UHRF1BP1LA0JNW5 1464 aa21.61■■□□□ 1.05
SCN8A-214ENST00000637709 PLCH2O75038 1416 aa21.61■■□□□ 1.05
SCN8A-214ENST00000637709 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
SCN8A-214ENST00000637709 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
SCN8A-214ENST00000637709 PLEKHH2Q8IVE3 1493 aa21.59■■□□□ 1.05
SCN8A-214ENST00000637709 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
SCN8A-214ENST00000637709 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
SCN8A-214ENST00000637709 FAM135AQ9P2D6 1515 aa21.56■■□□□ 1.04
SCN8A-214ENST00000637709 ANP32CO43423 234 aa21.55■■□□□ 1.04
SCN8A-214ENST00000637709 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
SCN8A-214ENST00000637709 RSPH4AQ5TD94 716 aa21.55■■□□□ 1.04
SCN8A-214ENST00000637709 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
SCN8A-214ENST00000637709 WDR7Q9Y4E6 1490 aa21.54■■□□□ 1.04
SCN8A-214ENST00000637709 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
SCN8A-214ENST00000637709 ABCC1P33527 1531 aa21.52■■□□□ 1.04
SCN8A-214ENST00000637709 ASXL2Q76L83 1435 aa21.52■■□□□ 1.03
SCN8A-214ENST00000637709 SPAG9O60271 1321 aaKnown RBP21.49■■□□□ 1.03
SCN8A-214ENST00000637709 KDM5DQ9BY66 1539 aa21.48■■□□□ 1.03
SCN8A-214ENST00000637709 MAST1Q9Y2H9 1570 aa21.47■■□□□ 1.03
SCN8A-214ENST00000637709 FANCAO15360 1455 aa21.47■■□□□ 1.03
SCN8A-214ENST00000637709 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
SCN8A-214ENST00000637709 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCN8A-214ENST00000637709 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
SCN8A-214ENST00000637709 CCDC7Q96M83 1385 aa21.42■■□□□ 1.02
SCN8A-214ENST00000637709 USP47Q96K76 1375 aa21.42■■□□□ 1.02
SCN8A-214ENST00000637709 DUOX2Q9NRD8 1548 aa21.42■■□□□ 1.02
SCN8A-214ENST00000637709 UNC13BO14795 1591 aa21.42■■□□□ 1.02
SCN8A-214ENST00000637709 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
SCN8A-214ENST00000637709 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
SCN8A-214ENST00000637709 PLA2R1Q13018 1463 aa21.41■■□□□ 1.02
SCN8A-214ENST00000637709 CCDC144AA2RUR9 1427 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms