RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 EHBP1L1Q8N3D4 1523 aa27.51■■□□□ 1.99
CACNA1A-243ENST00000637616 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
CACNA1A-243ENST00000637616 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
CACNA1A-243ENST00000637616 SLC4A1APQ9BWU0 796 aaKnown RBP27.45■■□□□ 1.98
CACNA1A-243ENST00000637616 CCDC136Q96JN2 1154 aa27.44■■□□□ 1.98
CACNA1A-243ENST00000637616 HECW1Q76N89 1606 aa27.44■■□□□ 1.98
CACNA1A-243ENST00000637616 ZNF644Q9H582 1327 aaPredicted RBP27.42■■□□□ 1.98
CACNA1A-243ENST00000637616 ANKRD30BQ9BXX2 1392 aa27.41■■□□□ 1.98
CACNA1A-243ENST00000637616 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
CACNA1A-243ENST00000637616 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
CACNA1A-243ENST00000637616 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
CACNA1A-243ENST00000637616 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
CACNA1A-243ENST00000637616 GCC2Q8IWJ2 1684 aa27.38■■□□□ 1.97
CACNA1A-243ENST00000637616 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
CACNA1A-243ENST00000637616 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
CACNA1A-243ENST00000637616 NUDCQ9Y266 331 aa27.36■■□□□ 1.97
CACNA1A-243ENST00000637616 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
CACNA1A-243ENST00000637616 RPRD2Q5VT52 1461 aaKnown RBP27.35■■□□□ 1.97
CACNA1A-243ENST00000637616 SMG6Q86US8 1419 aaKnown RBP27.33■■□□□ 1.97
CACNA1A-243ENST00000637616 MYT1LQ9UL68 1186 aa27.32■■□□□ 1.96
CACNA1A-243ENST00000637616 TEX14Q8IWB6 1497 aa27.32■■□□□ 1.96
CACNA1A-243ENST00000637616 THOC2Q8NI27 1593 aaKnown RBP27.32■■□□□ 1.96
CACNA1A-243ENST00000637616 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
CACNA1A-243ENST00000637616 ANP32AP39687 249 aaKnown RBP27.29■■□□□ 1.96
CACNA1A-243ENST00000637616 DHX29Q7Z478 1369 aaKnown RBP27.29■■□□□ 1.96
CACNA1A-243ENST00000637616 IPO9Q96P70 1041 aaKnown RBP27.27■■□□□ 1.96
CACNA1A-243ENST00000637616 SALL2Q9Y467 1007 aaPredicted RBP27.26■■□□□ 1.95
CACNA1A-243ENST00000637616 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
CACNA1A-243ENST00000637616 MIA2Q96PC5 1412 aa27.24■■□□□ 1.95
CACNA1A-243ENST00000637616 TMC1Q8TDI8 760 aa27.24■■□□□ 1.95
CACNA1A-243ENST00000637616 DAPK1P53355 1430 aa27.24■■□□□ 1.95
CACNA1A-243ENST00000637616 ZBTB47Q9UFB7 747 aaPredicted RBP27.24■■□□□ 1.95
CACNA1A-243ENST00000637616 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
CACNA1A-243ENST00000637616 USP47Q96K76 1375 aa27.22■■□□□ 1.95
CACNA1A-243ENST00000637616 ABCC5O15440 1437 aa27.22■■□□□ 1.95
CACNA1A-243ENST00000637616 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
CACNA1A-243ENST00000637616 PNISRQ8TF01 805 aaKnown RBP27.21■■□□□ 1.95
CACNA1A-243ENST00000637616 RNF123Q5XPI4 1314 aa27.21■■□□□ 1.95
CACNA1A-243ENST00000637616 ZNF777Q9ULD5 760 aaPredicted RBP27.17■■□□□ 1.94
CACNA1A-243ENST00000637616 RTL5Q5HYW3 569 aaPredicted RBP27.15■■□□□ 1.94
CACNA1A-243ENST00000637616 PKD2Q13563 968 aa27.13■■□□□ 1.93
CACNA1A-243ENST00000637616 BCORL1Q5H9F3 1711 aa27.13■■□□□ 1.93
CACNA1A-243ENST00000637616 EXOC6Q8TAG9 804 aa27.13■■□□□ 1.93
CACNA1A-243ENST00000637616 ROCK1Q13464 1354 aa27.13■■□□□ 1.93
CACNA1A-243ENST00000637616 KDM2AQ9Y2K7 1162 aa27.11■■□□□ 1.93
CACNA1A-243ENST00000637616 PZPP20742 1482 aa27.07■■□□□ 1.92
CACNA1A-243ENST00000637616 CARD11Q9BXL7 1154 aa27.07■■□□□ 1.92
CACNA1A-243ENST00000637616 LAS1LQ9Y4W2 734 aaKnown RBP27.07■■□□□ 1.92
CACNA1A-243ENST00000637616 WDR62O43379 1518 aa27.05■■□□□ 1.92
CACNA1A-243ENST00000637616 IQGAP2Q13576 1575 aa27.04■■□□□ 1.92
CACNA1A-243ENST00000637616 CFDP1Q9UEE9 299 aaPredicted RBP27.04■■□□□ 1.92
CACNA1A-243ENST00000637616 POLR1AO95602 1720 aaPredicted RBP27.04■■□□□ 1.92
CACNA1A-243ENST00000637616 ST20-MTHFSA0A0A6YYL1 179 aa27.03■■□□□ 1.92
CACNA1A-243ENST00000637616 RRP1P56182 461 aaKnown RBP27.03■■□□□ 1.92
CACNA1A-243ENST00000637616 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
CACNA1A-243ENST00000637616 SKAP1Q86WV1 359 aa27.02■■□□□ 1.92
CACNA1A-243ENST00000637616 DNMT1P26358 1616 aaKnown RBP27.01■■□□□ 1.91
CACNA1A-243ENST00000637616 RCAN3Q9UKA8 241 aa26.98■■□□□ 1.91
CACNA1A-243ENST00000637616 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
CACNA1A-243ENST00000637616 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
CACNA1A-243ENST00000637616 MBD5Q9P267 1494 aa26.97■■□□□ 1.91
CACNA1A-243ENST00000637616 PRKCSHP14314 528 aaPredicted RBP26.97■■□□□ 1.91
CACNA1A-243ENST00000637616 PDE4AP27815 886 aa26.97■■□□□ 1.91
CACNA1A-243ENST00000637616 IL27Q8NEV9 243 aa26.96■■□□□ 1.91
CACNA1A-243ENST00000637616 RTN4Q9NQC3 1192 aaKnown RBP26.96■■□□□ 1.91
CACNA1A-243ENST00000637616 PRG4Q92954 1404 aaPredicted RBP26.96■■□□□ 1.91
CACNA1A-243ENST00000637616 CDCA7LQ96GN5 454 aa26.96■■□□□ 1.91
CACNA1A-243ENST00000637616 PLIN1O60240 522 aa26.96■■□□□ 1.91
CACNA1A-243ENST00000637616 KIF15Q9NS87 1388 aa26.94■■□□□ 1.9
CACNA1A-243ENST00000637616 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
CACNA1A-243ENST00000637616 DCAF11Q8TEB1 546 aa26.93■■□□□ 1.9
CACNA1A-243ENST00000637616 KDM5CP41229 1560 aa26.92■■□□□ 1.9
CACNA1A-243ENST00000637616 NEFMP07197 916 aa26.92■■□□□ 1.9
CACNA1A-243ENST00000637616 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
CACNA1A-243ENST00000637616 NUP153P49790 1475 aaKnown RBP26.91■■□□□ 1.9
CACNA1A-243ENST00000637616 ANO8Q9HCE9 1232 aaPredicted RBP26.91■■□□□ 1.9
CACNA1A-243ENST00000637616 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
CACNA1A-243ENST00000637616 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
CACNA1A-243ENST00000637616 TCERG1O14776 1098 aaKnown RBP26.89■■□□□ 1.9
CACNA1A-243ENST00000637616 CAMSAP2Q08AD1 1489 aa26.88■■□□□ 1.89
CACNA1A-243ENST00000637616 NUP155O75694 1391 aa26.88■■□□□ 1.89
CACNA1A-243ENST00000637616 ROCK2O75116 1388 aaKnown RBP26.87■■□□□ 1.89
CACNA1A-243ENST00000637616 BACH2Q9BYV9 841 aa26.87■■□□□ 1.89
CACNA1A-243ENST00000637616 BRD4O60885 1362 aaPredicted RBP26.86■■□□□ 1.89
CACNA1A-243ENST00000637616 RALBP1Q15311 655 aa26.85■■□□□ 1.89
CACNA1A-243ENST00000637616 KIF14Q15058 1648 aa26.84■■□□□ 1.89
CACNA1A-243ENST00000637616 PBRM1Q86U86 1689 aa26.81■■□□□ 1.88
CACNA1A-243ENST00000637616 CC2D1BQ5T0F9 858 aaKnown RBP26.81■■□□□ 1.88
CACNA1A-243ENST00000637616 ANKRD50Q9ULJ7 1429 aa26.81■■□□□ 1.88
CACNA1A-243ENST00000637616 DISP1Q96F81 1524 aa26.8■■□□□ 1.88
CACNA1A-243ENST00000637616 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
CACNA1A-243ENST00000637616 ANKRD30AQ9BXX3 1397 aa26.8■■□□□ 1.88
CACNA1A-243ENST00000637616 RALGAPBQ86X10 1494 aa26.79■■□□□ 1.88
CACNA1A-243ENST00000637616 GPATCH8Q9UKJ3 1502 aaKnown RBP26.78■■□□□ 1.88
CACNA1A-243ENST00000637616 NLRP13Q86W25 1043 aa26.78■■□□□ 1.88
CACNA1A-243ENST00000637616 RGL3Q3MIN7 710 aa26.77■■□□□ 1.88
CACNA1A-243ENST00000637616 CRBNQ96SW2 442 aa26.77■■□□□ 1.88
CACNA1A-243ENST00000637616 SLC4A3P48751 1232 aa26.76■■□□□ 1.88
CACNA1A-243ENST00000637616 UHRF1BP1Q6BDS2 1440 aa26.75■■□□□ 1.87
CACNA1A-243ENST00000637616 TROQ12816 1431 aaPredicted RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms