RNA–Protein interactions for RNA: ENST00000637573.1

KCNQ2-238, Transcript of potassium voltage-gated channel subfamily Q member 2, human

TSL 5

Gene KCNQ2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ2-238	ENST00000637573	PTMS	P20962	102 aa		9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	RBM10	P98175	930 aa	Known RBP	9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	PDE4C	Q08493	712 aa		9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	FAM161A	Q3B820	660 aa		9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	CCDC144A	A2RUR9	1427 aa		9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	TOP2B	Q02880	1626 aa		9.38	□□□□□ -0.91
KCNQ2-238	ENST00000637573	GOLGA6L3	A6NEY3	463 aa		9.37	□□□□□ -0.91
KCNQ2-238	ENST00000637573	MRE11	P49959	708 aa		9.37	□□□□□ -0.91
KCNQ2-238	ENST00000637573	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.37	□□□□□ -0.91
KCNQ2-238	ENST00000637573	AKNA	Q7Z591	1439 aa		9.37	□□□□□ -0.91
KCNQ2-238	ENST00000637573	ROCK2	O75116	1388 aa	Known RBP	9.37	□□□□□ -0.91
KCNQ2-238	ENST00000637573	BIVM-ERCC5	R4GMW8	1640 aa		9.35	□□□□□ -0.91
KCNQ2-238	ENST00000637573	HFM1	A2PYH4	1435 aa		9.35	□□□□□ -0.91
KCNQ2-238	ENST00000637573	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.35	□□□□□ -0.91
KCNQ2-238	ENST00000637573	DCAF11	Q8TEB1	546 aa		9.35	□□□□□ -0.91
KCNQ2-238	ENST00000637573	ZMYM4	Q5VZL5	1548 aa		9.35	□□□□□ -0.91
KCNQ2-238	ENST00000637573	ARHGAP35	Q9NRY4	1499 aa		9.34	□□□□□ -0.91
KCNQ2-238	ENST00000637573	TNNT2	P45379	298 aa	Predicted RBP	9.34	□□□□□ -0.91
KCNQ2-238	ENST00000637573	RCAN3	Q9UKA8	241 aa		9.34	□□□□□ -0.91
KCNQ2-238	ENST00000637573	CFAP43	Q8NDM7	1665 aa		9.34	□□□□□ -0.91
KCNQ2-238	ENST00000637573	FMN1	Q68DA7	1419 aa		9.33	□□□□□ -0.92
KCNQ2-238	ENST00000637573	FSD2	A1L4K1	749 aa		9.33	□□□□□ -0.92
KCNQ2-238	ENST00000637573	FRAT2	O75474	233 aa	Predicted RBP	9.33	□□□□□ -0.92
KCNQ2-238	ENST00000637573	UTP14C	Q5TAP6	766 aa	Known RBP	9.33	□□□□□ -0.92
KCNQ2-238	ENST00000637573	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.33	□□□□□ -0.92
KCNQ2-238	ENST00000637573	KIF27	Q86VH2	1401 aa		9.32	□□□□□ -0.92
KCNQ2-238	ENST00000637573	MIA2	Q96PC5	1412 aa		9.32	□□□□□ -0.92
KCNQ2-238	ENST00000637573	BRD4	O60885	1362 aa	Predicted RBP	9.32	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PHLDB1	Q86UU1	1377 aa		9.32	□□□□□ -0.92
KCNQ2-238	ENST00000637573	ESPN	B1AK53	854 aa		9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	FAM50A	Q14320	339 aa	Known RBP	9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	TRIM44	Q96DX7	344 aa	Predicted RBP	9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	MYH16	Q9H6N6	1097 aa		9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PRDM4	Q9UKN5	801 aa		9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	KDM5B	Q9UGL1	1544 aa		9.31	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PLEKHH2	Q8IVE3	1493 aa		9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	LRPPRC	P42704	1394 aa	Known RBP	9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	ZMYM3	Q14202	1370 aa		9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	TAF3	Q5VWG9	929 aa		9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	EXOC6	Q8TAG9	804 aa		9.3	□□□□□ -0.92
KCNQ2-238	ENST00000637573	AQR	O60306	1485 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PDIA4	P13667	645 aa	Known RBP	9.29	□□□□□ -0.92
KCNQ2-238	ENST00000637573	RANGAP1	P46060	587 aa	Predicted RBP	9.29	□□□□□ -0.92
KCNQ2-238	ENST00000637573	RALBP1	Q15311	655 aa		9.29	□□□□□ -0.92
KCNQ2-238	ENST00000637573	CCDC184	Q52MB2	194 aa		9.29	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PTPN23	Q9H3S7	1636 aa		9.28	□□□□□ -0.92
KCNQ2-238	ENST00000637573	TAF7L	Q5H9L4	462 aa		9.28	□□□□□ -0.92
KCNQ2-238	ENST00000637573	PNISR	Q8TF01	805 aa	Known RBP	9.28	□□□□□ -0.92
KCNQ2-238	ENST00000637573	SCAPER	Q9BY12	1400 aa		9.28	□□□□□ -0.92
KCNQ2-238	ENST00000637573	XRCC6	P12956	609 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
KCNQ2-238	ENST00000637573	HS1BP3	Q53T59	392 aa		9.27	□□□□□ -0.93
KCNQ2-238	ENST00000637573	TMC1	Q8TDI8	760 aa		9.27	□□□□□ -0.93
KCNQ2-238	ENST00000637573	EIF3A	Q14152	1382 aa	Known RBP	9.26	□□□□□ -0.93
KCNQ2-238	ENST00000637573	DDX11L8	A8MPP1	907 aa		9.26	□□□□□ -0.93
KCNQ2-238	ENST00000637573	SKOR2	Q2VWA4	1001 aa	Predicted RBP	9.26	□□□□□ -0.93
KCNQ2-238	ENST00000637573	ANP32B	Q92688	251 aa	Known RBP	9.26	□□□□□ -0.93
KCNQ2-238	ENST00000637573	HECW1	Q76N89	1606 aa		9.26	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CSPP1	Q1MSJ5	1256 aa		9.25	□□□□□ -0.93
KCNQ2-238	ENST00000637573	UPF2	Q9HAU5	1272 aa	Known RBP	9.25	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CUX1	P39880	1505 aa		9.25	□□□□□ -0.93
KCNQ2-238	ENST00000637573	KIF15	Q9NS87	1388 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	SPATA31E1	Q6ZUB1	1445 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	FYCO1	Q9BQS8	1478 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	OFD1	O75665	1012 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	KIF20A	O95235	890 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CNGB1	Q14028	1251 aa	Predicted RBP	9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	GTPBP4	Q9BZE4	634 aa	Known RBP	9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	KDM2B	Q8NHM5	1336 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	MAPK8IP3	Q9UPT6	1336 aa		9.24	□□□□□ -0.93
KCNQ2-238	ENST00000637573	FGD6	Q6ZV73	1430 aa		9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	DYNC1I1	O14576	645 aa		9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CCDC173	Q0VFZ6	552 aa		9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	POGK	Q9P215	609 aa		9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	KIF7	Q2M1P5	1343 aa		9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	DHX29	Q7Z478	1369 aa	Known RBP	9.23	□□□□□ -0.93
KCNQ2-238	ENST00000637573	MYOM3	Q5VTT5	1437 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CANX	P27824	592 aa	Known RBP	9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	MCM4	P33991	863 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	MCM5	P33992	734 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	C8orf34	Q49A92	452 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	CHMP5	Q9NZZ3	219 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	NAIP	Q13075	1403 aa		9.22	□□□□□ -0.93
KCNQ2-238	ENST00000637573	VIRMA	Q69YN4	1812 aa	Known RBP	9.21	□□□□□ -0.93
KCNQ2-238	ENST00000637573		A0A0U1RQG5	324 aa	Predicted RBP	9.21	□□□□□ -0.94
KCNQ2-238	ENST00000637573	GRPEL1	Q9HAV7	217 aa		9.21	□□□□□ -0.94
KCNQ2-238	ENST00000637573	EFCAB5	A4FU69	1503 aa		9.21	□□□□□ -0.94
KCNQ2-238	ENST00000637573	VGF	O15240	615 aa	Predicted RBP	9.2	□□□□□ -0.94
KCNQ2-238	ENST00000637573	LETM1	O95202	739 aa	Predicted RBP	9.2	□□□□□ -0.94
KCNQ2-238	ENST00000637573	KIAA1211	Q6ZU35	1233 aa		9.2	□□□□□ -0.94
KCNQ2-238	ENST00000637573	ZSCAN30	Q86W11	494 aa		9.2	□□□□□ -0.94
KCNQ2-238	ENST00000637573	CASKIN1	Q8WXD9	1431 aa		9.2	□□□□□ -0.94
KCNQ2-238	ENST00000637573	MSN	P26038	577 aa	Known RBP	9.19	□□□□□ -0.94
KCNQ2-238	ENST00000637573	DMTN	Q08495	405 aa		9.19	□□□□□ -0.94
KCNQ2-238	ENST00000637573	IPO4	Q8TEX9	1081 aa	Known RBP	9.19	□□□□□ -0.94
KCNQ2-238	ENST00000637573	PPP1R9B	Q96SB3	815 aa		9.19	□□□□□ -0.94
KCNQ2-238	ENST00000637573	TRAK2	O60296	914 aa		9.18	□□□□□ -0.94
KCNQ2-238	ENST00000637573	SLC4A3	P48751	1232 aa		9.18	□□□□□ -0.94

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