RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MLECQ14165 292 aa7.68□□□□□ -1.18
CHD2-227ENST00000637572 DIEXFQ68CQ4 756 aaKnown RBP7.68□□□□□ -1.18
CHD2-227ENST00000637572 MAGI1Q96QZ7 1491 aaPredicted RBP7.68□□□□□ -1.18
CHD2-227ENST00000637572 BIVM-ERCC5R4GMW8 1640 aa7.68□□□□□ -1.18
CHD2-227ENST00000637572 PLCD3Q8N3E9 789 aa7.68□□□□□ -1.18
CHD2-227ENST00000637572 ZNF219Q9P2Y4 722 aaPredicted RBP7.68□□□□□ -1.18
CHD2-227ENST00000637572 CUL7Q14999 1698 aa7.68□□□□□ -1.18
CHD2-227ENST00000637572 KANK1Q14678 1352 aa7.67□□□□□ -1.18
CHD2-227ENST00000637572 URB2Q14146 1524 aaKnown RBP7.67□□□□□ -1.18
CHD2-227ENST00000637572 SNAPC4Q5SXM2 1469 aa7.66□□□□□ -1.18
CHD2-227ENST00000637572 KIAA0586Q9BVV6 1533 aa7.66□□□□□ -1.18
CHD2-227ENST00000637572 ANP32CO43423 234 aa7.66□□□□□ -1.18
CHD2-227ENST00000637572 CASKIN1Q8WXD9 1431 aa7.66□□□□□ -1.18
CHD2-227ENST00000637572 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
CHD2-227ENST00000637572 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.18
CHD2-227ENST00000637572 SYNJ2O15056 1496 aa7.65□□□□□ -1.18
CHD2-227ENST00000637572 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
CHD2-227ENST00000637572 SETD5Q9C0A6 1442 aa7.64□□□□□ -1.19
CHD2-227ENST00000637572 FYCO1Q9BQS8 1478 aa7.63□□□□□ -1.19
CHD2-227ENST00000637572 U3KPZ7 1027 aaPredicted RBP7.63□□□□□ -1.19
CHD2-227ENST00000637572 PRG4Q92954 1404 aaPredicted RBP7.62□□□□□ -1.19
CHD2-227ENST00000637572 YTHDC1Q96MU7 727 aaKnown RBP7.6□□□□□ -1.19
CHD2-227ENST00000637572 GRIN2AQ12879 1464 aa7.6□□□□□ -1.19
CHD2-227ENST00000637572 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
CHD2-227ENST00000637572 HDGFP51858 240 aaKnown RBP7.59□□□□□ -1.19
CHD2-227ENST00000637572 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
CHD2-227ENST00000637572 IQGAP2Q13576 1575 aa7.59□□□□□ -1.19
CHD2-227ENST00000637572 RGL2O15211 777 aa7.59□□□□□ -1.19
CHD2-227ENST00000637572 SPAG9O60271 1321 aaKnown RBP7.59□□□□□ -1.2
CHD2-227ENST00000637572 EIF4G2P78344 907 aaKnown RBP eCLIP7.58□□□□□ -1.2
CHD2-227ENST00000637572 MYOM3Q5VTT5 1437 aa7.58□□□□□ -1.2
CHD2-227ENST00000637572 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
CHD2-227ENST00000637572 WDR97A6NE52 1622 aa7.58□□□□□ -1.2
CHD2-227ENST00000637572 LRRC9Q6ZRR7 1453 aa7.57□□□□□ -1.2
CHD2-227ENST00000637572 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
CHD2-227ENST00000637572 MIER1Q8N108 512 aa7.57□□□□□ -1.2
CHD2-227ENST00000637572 ARAP1Q96P48 1450 aa7.57□□□□□ -1.2
CHD2-227ENST00000637572 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
CHD2-227ENST00000637572 NEFMP07197 916 aa7.56□□□□□ -1.2
CHD2-227ENST00000637572 WDR62O43379 1518 aa7.56□□□□□ -1.2
CHD2-227ENST00000637572 HECW1Q76N89 1606 aa7.56□□□□□ -1.2
CHD2-227ENST00000637572 PRDM2Q13029 1718 aa7.56□□□□□ -1.2
CHD2-227ENST00000637572 EHBP1L1Q8N3D4 1523 aa7.55□□□□□ -1.2
CHD2-227ENST00000637572 PLEKHH2Q8IVE3 1493 aa7.55□□□□□ -1.2
CHD2-227ENST00000637572 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 UACAQ9BZF9 1416 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 RAB3GAP2Q9H2M9 1393 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 TROQ12816 1431 aaPredicted RBP7.54□□□□□ -1.2
CHD2-227ENST00000637572 POLA2Q14181 598 aa7.54□□□□□ -1.2
CHD2-227ENST00000637572 NUP155O75694 1391 aa7.53□□□□□ -1.2
CHD2-227ENST00000637572 ZNF608Q9ULD9 1512 aaPredicted RBP7.53□□□□□ -1.2
CHD2-227ENST00000637572 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
CHD2-227ENST00000637572 SPOCK2Q92563 424 aa7.53□□□□□ -1.2
CHD2-227ENST00000637572 HNRNPMP52272 730 aaKnown RBP eCLIP7.53□□□□□ -1.29e-7■■■□□ 17.9
CHD2-227ENST00000637572 MKRN4PQ13434 485 aaPredicted RBP7.53□□□□□ -1.2
CHD2-227ENST00000637572 NCOA2Q15596 1464 aa7.52□□□□□ -1.2
CHD2-227ENST00000637572 CAPN15O75808 1086 aa7.52□□□□□ -1.21
CHD2-227ENST00000637572 CNGB1Q14028 1251 aaPredicted RBP7.52□□□□□ -1.21
CHD2-227ENST00000637572 MPHOSPH9Q99550 1183 aa7.52□□□□□ -1.21
CHD2-227ENST00000637572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.52□□□□□ -1.21
CHD2-227ENST00000637572 ABCB7O75027 752 aa7.51□□□□□ -1.21
CHD2-227ENST00000637572 PIP4K2BP78356 416 aa7.51□□□□□ -1.21
CHD2-227ENST00000637572 FBXO41Q8TF61 875 aa7.51□□□□□ -1.21
CHD2-227ENST00000637572 RGL3Q3MIN7 710 aa7.51□□□□□ -1.21
CHD2-227ENST00000637572 GGT6Q6P531 493 aa7.5□□□□□ -1.21
CHD2-227ENST00000637572 KIF3BO15066 747 aa7.5□□□□□ -1.21
CHD2-227ENST00000637572 DAXXQ9UER7 740 aaPredicted RBP7.5□□□□□ -1.21
CHD2-227ENST00000637572 CARD11Q9BXL7 1154 aa7.5□□□□□ -1.21
CHD2-227ENST00000637572 TIAM1Q13009 1591 aa7.49□□□□□ -1.21
CHD2-227ENST00000637572 RRBP1Q9P2E9 1410 aaKnown RBP7.49□□□□□ -1.21
CHD2-227ENST00000637572 KIF21AQ7Z4S6 1674 aa7.49□□□□□ -1.21
CHD2-227ENST00000637572 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
CHD2-227ENST00000637572 EPRSP07814 1512 aaKnown RBP7.49□□□□□ -1.21
CHD2-227ENST00000637572 PHLDB1Q86UU1 1377 aa7.48□□□□□ -1.21
CHD2-227ENST00000637572 HSPA2P54652 639 aa7.48□□□□□ -1.21
CHD2-227ENST00000637572 ADAMTS12P58397 1594 aa7.48□□□□□ -1.21
CHD2-227ENST00000637572 WASHC2CQ9Y4E1 1318 aa7.48□□□□□ -1.21
CHD2-227ENST00000637572 THOC2Q8NI27 1593 aaKnown RBP7.48□□□□□ -1.21
CHD2-227ENST00000637572 ARHGAP5Q13017 1502 aa7.47□□□□□ -1.21
CHD2-227ENST00000637572 DDX10Q13206 875 aaKnown RBP7.46□□□□□ -1.21
CHD2-227ENST00000637572 SIN3AQ96ST3 1273 aa7.46□□□□□ -1.21
CHD2-227ENST00000637572 DCAF11Q8TEB1 546 aa7.46□□□□□ -1.22
CHD2-227ENST00000637572 ARHGEF11O15085 1522 aa7.46□□□□□ -1.22
CHD2-227ENST00000637572 UGGT2Q9NYU1 1516 aa7.46□□□□□ -1.22
CHD2-227ENST00000637572 KIF15Q9NS87 1388 aa7.46□□□□□ -1.22
CHD2-227ENST00000637572 SUPT6HQ7KZ85 1726 aaKnown RBP7.45□□□□□ -1.22
CHD2-227ENST00000637572 UBAP1LF5GYI3 381 aa7.45□□□□□ -1.22
CHD2-227ENST00000637572 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
CHD2-227ENST00000637572 EIF4G3O43432 1585 aaKnown RBP7.44□□□□□ -1.22
CHD2-227ENST00000637572 NUP160Q12769 1436 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 TMF1P82094 1093 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 TMC1Q8TDI8 760 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 POGKQ9P215 609 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 CCDC144AA2RUR9 1427 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
CHD2-227ENST00000637572 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
CHD2-227ENST00000637572 HOMEZQ8IX15 550 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 391.2 ms