RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 FAM43BQ6ZT52 329 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 NBPF11Q86T75 865 aa3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 ZNF526Q8TF50 670 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 MAP7D2Q96T17 732 aa3.38□□□□□ -1.87
SYNGAP1-221ENST00000637490 APPP05067 770 aa3.37□□□□□ -1.87
SYNGAP1-221ENST00000637490 NBR1Q14596 966 aa3.37□□□□□ -1.87
SYNGAP1-221ENST00000637490 NBPF1Q3BBV0 1214 aa3.37□□□□□ -1.87
SYNGAP1-221ENST00000637490 PLEKHD1A6NEE1 506 aa3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 TNNT2P45379 298 aaPredicted RBP3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 RGS3P49796 1198 aa3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 SLC20A2Q08357 652 aa3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 CC2D1BQ5T0F9 858 aaKnown RBP3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 CASC1Q6TDU7 716 aa3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 FAM177A1Q8N128 213 aaPredicted RBP3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 ZNF830Q96NB3 372 aaPredicted RBP3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 TMEM51Q9NW97 253 aa3.36□□□□□ -1.87
SYNGAP1-221ENST00000637490 TPM2P07951 284 aa3.35□□□□□ -1.87
SYNGAP1-221ENST00000637490 PSEN1P49768 467 aa3.35□□□□□ -1.87
SYNGAP1-221ENST00000637490 EXOC8Q8IYI6 725 aa3.35□□□□□ -1.87
SYNGAP1-221ENST00000637490 NECTIN2Q92692 538 aa3.35□□□□□ -1.87
SYNGAP1-221ENST00000637490 YY1AP1Q9H869 796 aa3.35□□□□□ -1.87
SYNGAP1-221ENST00000637490 TCERG1O14776 1098 aaKnown RBP3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 NRDCO43847 1150 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 RAD21O60216 631 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 KIF20AO95235 890 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 NBPF9Q3BBW0 867 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 HSP90AB3PQ58FF7 597 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 MTERF4Q7Z6M4 381 aaKnown RBP3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 CARD10Q9BWT7 1032 aa3.34□□□□□ -1.87
SYNGAP1-221ENST00000637490 GOLGA6L3A6NEY3 463 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 RALBP1Q15311 655 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 TSHZ1Q6ZSZ6 1077 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 EGFL6Q8IUX8 553 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 TMTC2Q8N394 836 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 PLCD3Q8N3E9 789 aa3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.33□□□□□ -1.88
SYNGAP1-221ENST00000637490 CALRP27797 417 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 RBM25P49756 843 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 FKBP8Q14318 412 aa3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 SETDB1Q15047 1291 aa3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 FOXD1Q16676 465 aa3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 PPP4R3BQ5MIZ7 849 aa3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 KCTD17Q8N5Z5 321 aa3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 PHF23Q9BUL5 403 aaPredicted RBP3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 BSDC1Q9NW68 430 aaPredicted RBP3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 GEMIN8Q9NWZ8 242 aaKnown RBP3.32□□□□□ -1.88
SYNGAP1-221ENST00000637490 LETM1O95202 739 aaPredicted RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 MYCNP04198 464 aaPredicted RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 SSR1P43307 286 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 DMTNQ08495 405 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 FAM50AQ14320 339 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 DNTTIP2Q5QJE6 756 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 OTUD6BQ8N6M0 293 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 GTPBP4Q9BZE4 634 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 RBM28Q9NW13 759 aaKnown RBP3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 SLC52A1Q9NWF4 448 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 TERF2IPQ9NYB0 399 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 RAI14Q9P0K7 980 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 SH3BP1Q9Y3L3 701 aa3.31□□□□□ -1.88
SYNGAP1-221ENST00000637490 LOC102724159A0A0B4J2E5 919 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 E9PSI1 815 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 GOLIM4O00461 696 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 KDM4AO75164 1064 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 CLCN1P35523 988 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 HDAC1Q13547 482 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 GSE1Q14687 1217 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 PWP2Q15269 919 aaKnown RBP3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 NBPF6Q5VWK0 638 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 SPTY2D1Q68D10 685 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 RINLQ6ZS11 566 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 NBPF5PQ86XG9 351 aaPredicted RBP3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 MKL1Q969V6 931 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 DDRGK1Q96HY6 314 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 NBPF4Q96M43 638 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 TSPYL1Q9H0U9 437 aa3.3□□□□□ -1.88
SYNGAP1-221ENST00000637490 SOX12O15370 315 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 TERF1P54274 439 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 NBPF10Q6P3W6 841 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 CCDC125Q86Z20 511 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 FAM9BQ8IZU0 186 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 MIER1Q8N108 512 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 IPO9Q96P70 1041 aaKnown RBP3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 FEZ2Q9UHY8 353 aaPredicted RBP3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 MTMR7Q9Y216 660 aa3.29□□□□□ -1.88
SYNGAP1-221ENST00000637490 ZCCHC6Q5VYS8 1495 aaKnown RBP3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 HMGB1P1B2RPK0 211 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 ERCC3P19447 782 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 SATB1Q01826 763 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 MAP2K1Q02750 393 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 MYBPC2Q14324 1141 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 ZKSCAN8Q15776 578 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 CCDC96Q2M329 555 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 ZNF428Q96B54 188 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 TSPAN18Q96SJ8 248 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 ZBTB47Q9UFB7 747 aaPredicted RBP3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 RIPOR2Q9Y4F9 1068 aa3.28□□□□□ -1.88
SYNGAP1-221ENST00000637490 CADPSQ9ULU8 1353 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms