RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
LINC01548-202ENST00000637328 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
LINC01548-202ENST00000637328 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
LINC01548-202ENST00000637328 ATP10BO94823 1461 aa18.01■□□□□ 0.47
LINC01548-202ENST00000637328 RAPGEF3O95398 923 aa18.01■□□□□ 0.47
LINC01548-202ENST00000637328 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
LINC01548-202ENST00000637328 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
LINC01548-202ENST00000637328 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
LINC01548-202ENST00000637328 PHLDB1Q86UU1 1377 aa17.97■□□□□ 0.47
LINC01548-202ENST00000637328 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
LINC01548-202ENST00000637328 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
LINC01548-202ENST00000637328 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
LINC01548-202ENST00000637328 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
LINC01548-202ENST00000637328 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
LINC01548-202ENST00000637328 TROQ12816 1431 aaPredicted RBP17.91■□□□□ 0.46
LINC01548-202ENST00000637328 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
LINC01548-202ENST00000637328 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
LINC01548-202ENST00000637328 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
LINC01548-202ENST00000637328 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
LINC01548-202ENST00000637328 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
LINC01548-202ENST00000637328 NEO1Q92859 1461 aa17.85■□□□□ 0.45
LINC01548-202ENST00000637328 POGZQ7Z3K3 1410 aa17.84■□□□□ 0.45
LINC01548-202ENST00000637328 IQSEC2Q5JU85 1478 aa17.83■□□□□ 0.45
LINC01548-202ENST00000637328 LTBP4Q8N2S1 1624 aa17.81■□□□□ 0.44
LINC01548-202ENST00000637328 FANCAO15360 1455 aa17.81■□□□□ 0.44
LINC01548-202ENST00000637328 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
LINC01548-202ENST00000637328 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 ABCA9Q8IUA7 1624 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 PTPRTO14522 1441 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 KIF14Q15058 1648 aa17.8■□□□□ 0.44
LINC01548-202ENST00000637328 TTC37Q6PGP7 1564 aa17.79■□□□□ 0.44
LINC01548-202ENST00000637328 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.44
LINC01548-202ENST00000637328 FGD6Q6ZV73 1430 aa17.77■□□□□ 0.44
LINC01548-202ENST00000637328 MLECQ14165 292 aa17.76■□□□□ 0.43
LINC01548-202ENST00000637328 AKNAQ7Z591 1439 aa17.75■□□□□ 0.43
LINC01548-202ENST00000637328 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
LINC01548-202ENST00000637328 FER1L4A9Z1Z3 1794 aa17.74■□□□□ 0.43
LINC01548-202ENST00000637328 GPATCH8Q9UKJ3 1502 aaKnown RBP17.73■□□□□ 0.43
LINC01548-202ENST00000637328 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
LINC01548-202ENST00000637328 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
LINC01548-202ENST00000637328 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
LINC01548-202ENST00000637328 UBAP1LF5GYI3 381 aa17.71■□□□□ 0.43
LINC01548-202ENST00000637328 CEBPAP49715 358 aaPredicted RBP17.71■□□□□ 0.43
LINC01548-202ENST00000637328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC01548-202ENST00000637328 ITGAEP38570 1179 aa17.7■□□□□ 0.42
LINC01548-202ENST00000637328 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
LINC01548-202ENST00000637328 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
LINC01548-202ENST00000637328 RICTORQ6R327 1708 aa17.69■□□□□ 0.42
LINC01548-202ENST00000637328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC01548-202ENST00000637328 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
LINC01548-202ENST00000637328 PTPN23Q9H3S7 1636 aa17.68■□□□□ 0.42
LINC01548-202ENST00000637328 TCOF1Q13428 1488 aaKnown RBP17.67■□□□□ 0.42
LINC01548-202ENST00000637328 ZNF644Q9H582 1327 aaPredicted RBP17.67■□□□□ 0.42
LINC01548-202ENST00000637328 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
LINC01548-202ENST00000637328 ZFYVE16Q7Z3T8 1539 aa17.66■□□□□ 0.42
LINC01548-202ENST00000637328 ITSN2Q9NZM3 1697 aa17.65■□□□□ 0.42
LINC01548-202ENST00000637328 ZMYM4Q5VZL5 1548 aa17.65■□□□□ 0.42
LINC01548-202ENST00000637328 CDC42BPAQ5VT25 1732 aa17.64■□□□□ 0.41
LINC01548-202ENST00000637328 PLCH2O75038 1416 aa17.63■□□□□ 0.41
LINC01548-202ENST00000637328 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
LINC01548-202ENST00000637328 MAGI2Q86UL8 1455 aa17.62■□□□□ 0.41
LINC01548-202ENST00000637328 CAMSAP2Q08AD1 1489 aa17.61■□□□□ 0.41
LINC01548-202ENST00000637328 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
LINC01548-202ENST00000637328 PREX2Q70Z35 1606 aa17.61■□□□□ 0.41
LINC01548-202ENST00000637328 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
LINC01548-202ENST00000637328 MYO5CQ9NQX4 1742 aa17.59■□□□□ 0.41
LINC01548-202ENST00000637328 HSPA1LP34931 641 aa17.59■□□□□ 0.41
LINC01548-202ENST00000637328 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
LINC01548-202ENST00000637328 NCOA1Q15788 1441 aa17.57■□□□□ 0.4
LINC01548-202ENST00000637328 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.4
LINC01548-202ENST00000637328 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
LINC01548-202ENST00000637328 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
LINC01548-202ENST00000637328 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
LINC01548-202ENST00000637328 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
LINC01548-202ENST00000637328 ABCC5O15440 1437 aa17.54■□□□□ 0.4
LINC01548-202ENST00000637328 DAPK1P53355 1430 aa17.54■□□□□ 0.4
LINC01548-202ENST00000637328 ATP10AO60312 1499 aa17.53■□□□□ 0.4
LINC01548-202ENST00000637328 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.39
LINC01548-202ENST00000637328 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
LINC01548-202ENST00000637328 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
LINC01548-202ENST00000637328 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
LINC01548-202ENST00000637328 KIAA1107Q9UPP5 1409 aa17.5■□□□□ 0.39
LINC01548-202ENST00000637328 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
LINC01548-202ENST00000637328 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
LINC01548-202ENST00000637328 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
LINC01548-202ENST00000637328 SYCP2Q9BX26 1530 aa17.48■□□□□ 0.39
LINC01548-202ENST00000637328 TSPY4P0CV99 314 aa17.48■□□□□ 0.39
LINC01548-202ENST00000637328 TSPY10P0CW01 314 aa17.48■□□□□ 0.39
LINC01548-202ENST00000637328 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
LINC01548-202ENST00000637328 RRP7BPQ9NSQ0 103 aa17.47■□□□□ 0.39
LINC01548-202ENST00000637328 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
LINC01548-202ENST00000637328 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
LINC01548-202ENST00000637328 ABCC1P33527 1531 aa17.46■□□□□ 0.39
LINC01548-202ENST00000637328 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
LINC01548-202ENST00000637328 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
LINC01548-202ENST00000637328 C3P01024 1663 aa17.44■□□□□ 0.38
LINC01548-202ENST00000637328 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
LINC01548-202ENST00000637328 NCKAP5LQ9HCH0 1330 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms