RNA–Protein interactions for RNA: ENST00000637301.1

CACNA1D-223, Transcript of calcium voltage-gated channel subunit alpha1 D, human

TSL 5

Gene CACNA1D, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1D-223	ENST00000637301	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	TMEM51	Q9NW97	253 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	PHLDB1	Q86UU1	1377 aa		4.88	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ABCA5	Q8WWZ7	1642 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	OFD1	O75665	1012 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	BRD2	P25440	801 aa	Known RBP	4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	MRE11	P49959	708 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	RIPK4	P57078	832 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CNGB1	Q14028	1251 aa	Predicted RBP	4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	TEX2	Q8IWB9	1127 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	SIN3A	Q96ST3	1273 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CCDC144A	A2RUR9	1427 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	MYOM3	Q5VTT5	1437 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	AKNA	Q7Z591	1439 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ERICH3	Q5RHP9	1530 aa		4.87	□□□□□ -1.63
CACNA1D-223	ENST00000637301	SLC20A2	Q08357	652 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	FTSJ3	Q8IY81	847 aa	Known RBP	4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	POGK	Q9P215	609 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	INSR	P06213	1382 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	NCOA1	Q15788	1441 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	SCAPER	Q9BY12	1400 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ARAP1	Q96P48	1450 aa		4.86	□□□□□ -1.63
CACNA1D-223	ENST00000637301	GOLGA6L3	A6NEY3	463 aa		4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	LETM1	O95202	739 aa	Predicted RBP	4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ZSCAN20	P17040	1043 aa	Predicted RBP	4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	RRP1	P56182	461 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CCDC184	Q52MB2	194 aa		4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	NPM2	Q86SE8	214 aa	Known RBP	4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	ANTXR1	Q9H6X2	564 aa		4.85	□□□□□ -1.63
CACNA1D-223	ENST00000637301	TOP2A	P11388	1531 aa	Known RBP	4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	FAM161A	Q3B820	660 aa		4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	HS1BP3	Q53T59	392 aa		4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	PPP4R3B	Q5MIZ7	849 aa		4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	KANK4	Q5T7N3	995 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	PPP1R9B	Q96SB3	815 aa		4.84	□□□□□ -1.63
CACNA1D-223	ENST00000637301	CECR2	Q9BXF3	1484 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	LRPPRC	P42704	1394 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CCDC7	Q96M83	1385 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ERBB4	Q15303	1308 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	KDM2B	Q8NHM5	1336 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	DYNC1I1	O14576	645 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	DCAF8L2	P0C7V8	631 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	MMP14	P50281	582 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PDE3B	Q13370	1112 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	C8orf34	Q49A92	452 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	KIAA1211	Q6ZU35	1233 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CHMP4B	Q9H444	224 aa	Known RBP	4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	MRS2	Q9HD23	443 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	WIZ	O95785	1651 aa		4.83	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZMYM4	Q5VZL5	1548 aa		4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZMYM3	Q14202	1370 aa		4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	EXOC6	Q8TAG9	804 aa		4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZNF830	Q96NB3	372 aa	Predicted RBP	4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CCDC94	Q9BW85	323 aa	Predicted RBP	4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	MYH16	Q9H6N6	1097 aa		4.82	□□□□□ -1.64
CACNA1D-223	ENST00000637301	RAPGEF2	Q9Y4G8	1499 aa		4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	KTN1	Q86UP2	1357 aa	Known RBP	4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	USP19	O94966	1318 aa		4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZNF500	O60304	480 aa	Predicted RBP	4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	TNNT2	P45379	298 aa	Predicted RBP	4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZSCAN30	Q86W11	494 aa		4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ANP32B	Q92688	251 aa	Known RBP	4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PRX	Q9BXM0	1461 aa		4.81	□□□□□ -1.64
CACNA1D-223	ENST00000637301	DHX29	Q7Z478	1369 aa	Known RBP	4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	TONSL	Q96HA7	1378 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	HSPA5	P11021	654 aa	Known RBP	4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	MCM4	P33991	863 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	MCM5	P33992	734 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	BECN1	Q14457	450 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PANK2	Q9BZ23	570 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	GRPEL1	Q9HAV7	217 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	RNF216	Q9NWF9	866 aa	Predicted RBP	4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	SPATA31E1	Q6ZUB1	1445 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	UACA	Q9BZF9	1416 aa		4.8	□□□□□ -1.64
CACNA1D-223	ENST00000637301	SLC4A3	P48751	1232 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CCDC173	Q0VFZ6	552 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	FAM9B	Q8IZU0	186 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	RGS22	Q8NE09	1264 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PNISR	Q8TF01	805 aa	Known RBP	4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZFP91	Q96JP5	570 aa	Predicted RBP	4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	RCAN3	Q9UKA8	241 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ARHGAP31	Q2M1Z3	1444 aa		4.79	□□□□□ -1.64
CACNA1D-223	ENST00000637301	POLR1A	O95602	1720 aa	Predicted RBP	4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	PTMS	P20962	102 aa		4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CSPP1	Q1MSJ5	1256 aa		4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	TRIM44	Q96DX7	344 aa	Predicted RBP	4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	YY1AP1	Q9H869	796 aa		4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	ROCK2	O75116	1388 aa	Known RBP	4.78	□□□□□ -1.64
CACNA1D-223	ENST00000637301	CCDC18	Q5T9S5	1454 aa		4.77	□□□□□ -1.65
CACNA1D-223	ENST00000637301	NLRP1	Q9C000	1473 aa		4.77	□□□□□ -1.65
CACNA1D-223	ENST00000637301	SCRIB	Q14160	1630 aa		4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms