RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 NUP160Q12769 1436 aa21.24■□□□□ 0.99
CACNA1A-235ENST00000637004 PRKRIP1Q9H875 184 aaPredicted RBP21.23■□□□□ 0.99
CACNA1A-235ENST00000637004 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
CACNA1A-235ENST00000637004 CCDC184Q52MB2 194 aa21.21■□□□□ 0.99
CACNA1A-235ENST00000637004 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
CACNA1A-235ENST00000637004 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
CACNA1A-235ENST00000637004 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
CACNA1A-235ENST00000637004 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
CACNA1A-235ENST00000637004 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-235ENST00000637004 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
CACNA1A-235ENST00000637004 KIAA0586Q9BVV6 1533 aa21.16■□□□□ 0.98
CACNA1A-235ENST00000637004 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
CACNA1A-235ENST00000637004 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
CACNA1A-235ENST00000637004 NBR1Q14596 966 aa21.15■□□□□ 0.98
CACNA1A-235ENST00000637004 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.98
CACNA1A-235ENST00000637004 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
CACNA1A-235ENST00000637004 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
CACNA1A-235ENST00000637004 IPO9Q96P70 1041 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-235ENST00000637004 SMG6Q86US8 1419 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-235ENST00000637004 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-235ENST00000637004 IQGAP2Q13576 1575 aa21.09■□□□□ 0.97
CACNA1A-235ENST00000637004 HECW1Q76N89 1606 aa21.09■□□□□ 0.97
CACNA1A-235ENST00000637004 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
CACNA1A-235ENST00000637004 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 CCDC136Q96JN2 1154 aa21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 ARHGEF11O15085 1522 aa21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 AKNAQ7Z591 1439 aa21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
CACNA1A-235ENST00000637004 EHBP1L1Q8N3D4 1523 aa21.05■□□□□ 0.96
CACNA1A-235ENST00000637004 ANO8Q9HCE9 1232 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-235ENST00000637004 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
CACNA1A-235ENST00000637004 DENND4BO75064 1496 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-235ENST00000637004 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
CACNA1A-235ENST00000637004 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
CACNA1A-235ENST00000637004 GCC2Q8IWJ2 1684 aa21.02■□□□□ 0.96
CACNA1A-235ENST00000637004 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
CACNA1A-235ENST00000637004 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
CACNA1A-235ENST00000637004 KIF7Q2M1P5 1343 aa21■□□□□ 0.95
CACNA1A-235ENST00000637004 TCOF1Q13428 1488 aaKnown RBP20.99■□□□□ 0.95
CACNA1A-235ENST00000637004 DISP1Q96F81 1524 aa20.99■□□□□ 0.95
CACNA1A-235ENST00000637004 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
CACNA1A-235ENST00000637004 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
CACNA1A-235ENST00000637004 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
CACNA1A-235ENST00000637004 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
CACNA1A-235ENST00000637004 CARMIL2Q6F5E8 1435 aa20.96■□□□□ 0.95
CACNA1A-235ENST00000637004 SAMD9Q5K651 1589 aa20.96■□□□□ 0.95
CACNA1A-235ENST00000637004 SPATA31E1Q6ZUB1 1445 aa20.96■□□□□ 0.95
CACNA1A-235ENST00000637004 PTPRGP23470 1445 aa20.95■□□□□ 0.94
CACNA1A-235ENST00000637004 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
CACNA1A-235ENST00000637004 LRRIQ1Q96JM4 1722 aa20.93■□□□□ 0.94
CACNA1A-235ENST00000637004 NBPF8Q3BBV2 869 aa20.92■□□□□ 0.94
CACNA1A-235ENST00000637004 POLR1AO95602 1720 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-235ENST00000637004 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
CACNA1A-235ENST00000637004 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
CACNA1A-235ENST00000637004 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.93
CACNA1A-235ENST00000637004 MIA2Q96PC5 1412 aa20.89■□□□□ 0.93
CACNA1A-235ENST00000637004 KDM6BO15054 1643 aa20.88■□□□□ 0.93
CACNA1A-235ENST00000637004 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
CACNA1A-235ENST00000637004 FOXD1Q16676 465 aa20.87■□□□□ 0.93
CACNA1A-235ENST00000637004 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
CACNA1A-235ENST00000637004 DHX29Q7Z478 1369 aaKnown RBP20.87■□□□□ 0.93
CACNA1A-235ENST00000637004 USP35Q9P2H5 1018 aa20.86■□□□□ 0.93
CACNA1A-235ENST00000637004 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
CACNA1A-235ENST00000637004 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.92
CACNA1A-235ENST00000637004 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
CACNA1A-235ENST00000637004 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
CACNA1A-235ENST00000637004 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
CACNA1A-235ENST00000637004 UBE2Q2Q8WVN8 375 aa20.8■□□□□ 0.92
CACNA1A-235ENST00000637004 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
CACNA1A-235ENST00000637004 SLC4A1APQ9BWU0 796 aaKnown RBP20.77■□□□□ 0.92
CACNA1A-235ENST00000637004 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
CACNA1A-235ENST00000637004 PPM1GO15355 546 aaPredicted RBP20.76■□□□□ 0.91
CACNA1A-235ENST00000637004 NEFMP07197 916 aa20.75■□□□□ 0.91
CACNA1A-235ENST00000637004 MS4A1P11836 297 aa20.75■□□□□ 0.91
CACNA1A-235ENST00000637004 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
CACNA1A-235ENST00000637004 NPM1P06748 294 aaKnown RBP eCLIP20.75■□□□□ 0.91
CACNA1A-235ENST00000637004 USP47Q96K76 1375 aa20.75■□□□□ 0.91
CACNA1A-235ENST00000637004 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
CACNA1A-235ENST00000637004 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
CACNA1A-235ENST00000637004 PDE4AP27815 886 aa20.73■□□□□ 0.91
CACNA1A-235ENST00000637004 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-235ENST00000637004 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
CACNA1A-235ENST00000637004 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-235ENST00000637004 EPRSP07814 1512 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-235ENST00000637004 DAPK1P53355 1430 aa20.72■□□□□ 0.91
CACNA1A-235ENST00000637004 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
CACNA1A-235ENST00000637004 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
CACNA1A-235ENST00000637004 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
CACNA1A-235ENST00000637004 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-235ENST00000637004 KTN1Q86UP2 1357 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-235ENST00000637004 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-235ENST00000637004 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
CACNA1A-235ENST00000637004 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
CACNA1A-235ENST00000637004 BRD4O60885 1362 aaPredicted RBP20.68■□□□□ 0.9
CACNA1A-235ENST00000637004 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
CACNA1A-235ENST00000637004 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
CACNA1A-235ENST00000637004 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
CACNA1A-235ENST00000637004 ABCC5O15440 1437 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms