RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
CACNA1D-220ENST00000636999 UACAQ9BZF9 1416 aa10.44□□□□□ -0.74
CACNA1D-220ENST00000636999 TROQ12816 1431 aaPredicted RBP10.43□□□□□ -0.74
CACNA1D-220ENST00000636999 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
CACNA1D-220ENST00000636999 HECW1Q76N89 1606 aa10.43□□□□□ -0.74
CACNA1D-220ENST00000636999 ZNF644Q9H582 1327 aaPredicted RBP10.42□□□□□ -0.74
CACNA1D-220ENST00000636999 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
CACNA1D-220ENST00000636999 DCAF11Q8TEB1 546 aa10.42□□□□□ -0.74
CACNA1D-220ENST00000636999 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
CACNA1D-220ENST00000636999 NEFMP07197 916 aa10.42□□□□□ -0.74
CACNA1D-220ENST00000636999 FOXD1Q16676 465 aa10.41□□□□□ -0.74
CACNA1D-220ENST00000636999 WASHC2CQ9Y4E1 1318 aa10.41□□□□□ -0.74
CACNA1D-220ENST00000636999 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
CACNA1D-220ENST00000636999 SENP3Q9H4L4 574 aaPredicted RBP10.41□□□□□ -0.74
CACNA1D-220ENST00000636999 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
CACNA1D-220ENST00000636999 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
CACNA1D-220ENST00000636999 EPRSP07814 1512 aaKnown RBP10.4□□□□□ -0.74
CACNA1D-220ENST00000636999 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
CACNA1D-220ENST00000636999 MRS2Q9HD23 443 aa10.39□□□□□ -0.75
CACNA1D-220ENST00000636999 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
CACNA1D-220ENST00000636999 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
CACNA1D-220ENST00000636999 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
CACNA1D-220ENST00000636999 ARHGAP5Q13017 1502 aa10.37□□□□□ -0.75
CACNA1D-220ENST00000636999 RTL5Q5HYW3 569 aaPredicted RBP10.37□□□□□ -0.75
CACNA1D-220ENST00000636999 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-220ENST00000636999 DHX57Q6P158 1386 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-220ENST00000636999 KIF15Q9NS87 1388 aa10.36□□□□□ -0.75
CACNA1D-220ENST00000636999 EIF4G3O43432 1585 aaKnown RBP10.36□□□□□ -0.75
CACNA1D-220ENST00000636999 ADAMTS12P58397 1594 aa10.36□□□□□ -0.75
CACNA1D-220ENST00000636999 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
CACNA1D-220ENST00000636999 CDK13Q14004 1512 aaKnown RBP10.35□□□□□ -0.75
CACNA1D-220ENST00000636999 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
CACNA1D-220ENST00000636999 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
CACNA1D-220ENST00000636999 C14orf37Q86TY3 774 aa10.34□□□□□ -0.75
CACNA1D-220ENST00000636999 POGKQ9P215 609 aa10.34□□□□□ -0.75
CACNA1D-220ENST00000636999 PLEKHH2Q8IVE3 1493 aa10.34□□□□□ -0.75
CACNA1D-220ENST00000636999 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
CACNA1D-220ENST00000636999 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
CACNA1D-220ENST00000636999 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
CACNA1D-220ENST00000636999 ANKRD50Q9ULJ7 1429 aa10.32□□□□□ -0.76
CACNA1D-220ENST00000636999 WDR97A6NE52 1622 aa10.32□□□□□ -0.76
CACNA1D-220ENST00000636999 SUPT6HQ7KZ85 1726 aaKnown RBP10.32□□□□□ -0.76
CACNA1D-220ENST00000636999 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
CACNA1D-220ENST00000636999 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
CACNA1D-220ENST00000636999 CCDC144AA2RUR9 1427 aa10.3□□□□□ -0.76
CACNA1D-220ENST00000636999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.3□□□□□ -0.76
CACNA1D-220ENST00000636999 UGGT2Q9NYU1 1516 aa10.3□□□□□ -0.76
CACNA1D-220ENST00000636999 TMF1P82094 1093 aa10.29□□□□□ -0.76
CACNA1D-220ENST00000636999 NUP160Q12769 1436 aa10.29□□□□□ -0.76
CACNA1D-220ENST00000636999 KNSTRNQ9Y448 316 aa10.29□□□□□ -0.76
CACNA1D-220ENST00000636999 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
CACNA1D-220ENST00000636999 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
CACNA1D-220ENST00000636999 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
CACNA1D-220ENST00000636999 C9orf84Q5VXU9 1444 aa10.27□□□□□ -0.76
CACNA1D-220ENST00000636999 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.76
CACNA1D-220ENST00000636999 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.77
CACNA1D-220ENST00000636999 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
CACNA1D-220ENST00000636999 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
CACNA1D-220ENST00000636999 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
CACNA1D-220ENST00000636999 SCAPERQ9BY12 1400 aa10.26□□□□□ -0.77
CACNA1D-220ENST00000636999 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
CACNA1D-220ENST00000636999 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
CACNA1D-220ENST00000636999 CD109Q6YHK3 1445 aa10.26□□□□□ -0.77
CACNA1D-220ENST00000636999 HSPA5P11021 654 aaKnown RBP10.25□□□□□ -0.77
CACNA1D-220ENST00000636999 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
CACNA1D-220ENST00000636999 KIF14Q15058 1648 aa10.24□□□□□ -0.77
CACNA1D-220ENST00000636999 DAPK1P53355 1430 aa10.24□□□□□ -0.77
CACNA1D-220ENST00000636999 RAPGEF3O95398 923 aa10.24□□□□□ -0.77
CACNA1D-220ENST00000636999 STK26Q9P289 416 aa10.24□□□□□ -0.77
CACNA1D-220ENST00000636999 KIAA0556O60303 1618 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 RAPGEF6Q8TEU7 1601 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 CCER2I3L3R5 266 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 ATP10BO94823 1461 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 ANP32EQ9BTT0 268 aa10.23□□□□□ -0.77
CACNA1D-220ENST00000636999 SRPK2P78362 688 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-220ENST00000636999 NUP153P49790 1475 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-220ENST00000636999 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1D-220ENST00000636999 STAC3Q96MF2 364 aa10.22□□□□□ -0.77
CACNA1D-220ENST00000636999 ROCK1Q13464 1354 aa10.21□□□□□ -0.77
CACNA1D-220ENST00000636999 EIF3AQ14152 1382 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-220ENST00000636999 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
CACNA1D-220ENST00000636999 CANXP27824 592 aaKnown RBP10.21□□□□□ -0.78
CACNA1D-220ENST00000636999 CFAP53Q96M91 514 aa10.21□□□□□ -0.78
CACNA1D-220ENST00000636999 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.78
CACNA1D-220ENST00000636999 NBR1Q14596 966 aa10.2□□□□□ -0.78
CACNA1D-220ENST00000636999 CAMSAP2Q08AD1 1489 aa10.19□□□□□ -0.78
CACNA1D-220ENST00000636999 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
CACNA1D-220ENST00000636999 DISP1Q96F81 1524 aa10.18□□□□□ -0.78
CACNA1D-220ENST00000636999 B4GALNT3Q6L9W6 998 aa10.18□□□□□ -0.78
CACNA1D-220ENST00000636999 ADGRL1O94910 1474 aa10.18□□□□□ -0.78
CACNA1D-220ENST00000636999 PTPN23Q9H3S7 1636 aa10.18□□□□□ -0.78
CACNA1D-220ENST00000636999 ASXL2Q76L83 1435 aa10.17□□□□□ -0.78
CACNA1D-220ENST00000636999 NAIPQ13075 1403 aa10.17□□□□□ -0.78
CACNA1D-220ENST00000636999 RBM19Q9Y4C8 960 aaKnown RBP10.17□□□□□ -0.78
CACNA1D-220ENST00000636999 ABCC5O15440 1437 aa10.17□□□□□ -0.78
CACNA1D-220ENST00000636999 GPATCH8Q9UKJ3 1502 aaKnown RBP10.16□□□□□ -0.78
CACNA1D-220ENST00000636999 FANCAO15360 1455 aa10.16□□□□□ -0.78
CACNA1D-220ENST00000636999 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms