RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 ABCC5O15440 1437 aa8.05□□□□□ -1.12
SYNGAP1-218ENST00000636905 DIEXFQ68CQ4 756 aaKnown RBP8.05□□□□□ -1.12
SYNGAP1-218ENST00000636905 CFDP1Q9UEE9 299 aaPredicted RBP8.05□□□□□ -1.12
SYNGAP1-218ENST00000636905 UHRF1BP1LA0JNW5 1464 aa8.05□□□□□ -1.12
SYNGAP1-218ENST00000636905 CAMSAP2Q08AD1 1489 aa8.05□□□□□ -1.12
SYNGAP1-218ENST00000636905 ERCC6L2Q5T890 1561 aa8.04□□□□□ -1.12
SYNGAP1-218ENST00000636905 CDC42BPBQ9Y5S2 1711 aa8.03□□□□□ -1.12
SYNGAP1-218ENST00000636905 ADGRL2O95490 1459 aa8.03□□□□□ -1.12
SYNGAP1-218ENST00000636905 RRP7BPQ9NSQ0 103 aa8.03□□□□□ -1.12
SYNGAP1-218ENST00000636905 CHIC2Q9UKJ5 165 aa8.03□□□□□ -1.12
SYNGAP1-218ENST00000636905 PREX2Q70Z35 1606 aa8.03□□□□□ -1.12
SYNGAP1-218ENST00000636905 ARHGEF5Q12774 1597 aa8.02□□□□□ -1.13
SYNGAP1-218ENST00000636905 ZNF644Q9H582 1327 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-218ENST00000636905 SHANK2Q9UPX8 1470 aa8.01□□□□□ -1.13
SYNGAP1-218ENST00000636905 MYO5CQ9NQX4 1742 aa8.01□□□□□ -1.13
SYNGAP1-218ENST00000636905 KDM6BO15054 1643 aa8.01□□□□□ -1.13
SYNGAP1-218ENST00000636905 ZCCHC11Q5TAX3 1644 aaKnown RBP8.01□□□□□ -1.13
SYNGAP1-218ENST00000636905 KDM5BQ9UGL1 1544 aa8□□□□□ -1.13
SYNGAP1-218ENST00000636905 RSPH4AQ5TD94 716 aa8□□□□□ -1.13
SYNGAP1-218ENST00000636905 SIN3AQ96ST3 1273 aa8□□□□□ -1.13
SYNGAP1-218ENST00000636905 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
SYNGAP1-218ENST00000636905 NCOA1Q15788 1441 aa7.99□□□□□ -1.13
SYNGAP1-218ENST00000636905 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
SYNGAP1-218ENST00000636905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNGAP1-218ENST00000636905 PPP1R15AO75807 674 aaPredicted RBP7.98□□□□□ -1.13
SYNGAP1-218ENST00000636905 NEUROD1Q13562 356 aa7.98□□□□□ -1.13
SYNGAP1-218ENST00000636905 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
SYNGAP1-218ENST00000636905 PLEKHH2Q8IVE3 1493 aa7.98□□□□□ -1.13
SYNGAP1-218ENST00000636905 SAMD9LQ8IVG5 1584 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 MPHOSPH9Q99550 1183 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 TTC37Q6PGP7 1564 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
SYNGAP1-218ENST00000636905 DENND4BO75064 1496 aaPredicted RBP7.96□□□□□ -1.13
SYNGAP1-218ENST00000636905 MBD5Q9P267 1494 aa7.96□□□□□ -1.13
SYNGAP1-218ENST00000636905 C9orf84Q5VXU9 1444 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 KIAA1107Q9UPP5 1409 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 CCDC141Q6ZP82 1450 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 ARHGAP5Q13017 1502 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 ARAP3Q8WWN8 1544 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 OSCARQ8IYS5 282 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 PLCH2O75038 1416 aa7.95□□□□□ -1.14
SYNGAP1-218ENST00000636905 ANKRD50Q9ULJ7 1429 aa7.94□□□□□ -1.14
SYNGAP1-218ENST00000636905 HNRNPMP52272 730 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNGAP1-218ENST00000636905 ANKRD30BQ9BXX2 1392 aa7.93□□□□□ -1.14
SYNGAP1-218ENST00000636905 PZPP20742 1482 aa7.93□□□□□ -1.14
SYNGAP1-218ENST00000636905 KDM5DQ9BY66 1539 aa7.93□□□□□ -1.14
SYNGAP1-218ENST00000636905 PLXNC1O60486 1568 aa7.93□□□□□ -1.14
SYNGAP1-218ENST00000636905 EFCAB2Q5VUJ9 269 aa7.92□□□□□ -1.14
SYNGAP1-218ENST00000636905 SLC4A1APQ9BWU0 796 aaKnown RBP7.92□□□□□ -1.14
SYNGAP1-218ENST00000636905 SYCP2Q9BX26 1530 aa7.92□□□□□ -1.14
SYNGAP1-218ENST00000636905 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
SYNGAP1-218ENST00000636905 RPRD2Q5VT52 1461 aaKnown RBP7.91□□□□□ -1.14
SYNGAP1-218ENST00000636905 WDR7Q9Y4E6 1490 aa7.91□□□□□ -1.14
SYNGAP1-218ENST00000636905 ABCA9Q8IUA7 1624 aa7.91□□□□□ -1.14
SYNGAP1-218ENST00000636905 KIF15Q9NS87 1388 aa7.9□□□□□ -1.14
SYNGAP1-218ENST00000636905 ABCC1P33527 1531 aa7.89□□□□□ -1.15
SYNGAP1-218ENST00000636905 UNC13BO14795 1591 aa7.88□□□□□ -1.15
SYNGAP1-218ENST00000636905 DUOX2Q9NRD8 1548 aa7.88□□□□□ -1.15
SYNGAP1-218ENST00000636905 MIER1Q8N108 512 aa7.88□□□□□ -1.15
SYNGAP1-218ENST00000636905 ARHGEF12Q9NZN5 1544 aa7.88□□□□□ -1.15
SYNGAP1-218ENST00000636905 RTEL1-TNFRSF6BF6WH68 1400 aa7.87□□□□□ -1.15
SYNGAP1-218ENST00000636905 NUP155O75694 1391 aa7.87□□□□□ -1.15
SYNGAP1-218ENST00000636905 NPM1P06748 294 aaKnown RBP eCLIP7.87□□□□□ -1.15
SYNGAP1-218ENST00000636905 ASXL2Q76L83 1435 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 IQGAP3Q86VI3 1631 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 PKD2Q13563 968 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 L3MBTL2Q969R5 705 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 TEX14Q8IWB6 1497 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 ERBINQ96RT1 1412 aa7.86□□□□□ -1.15
SYNGAP1-218ENST00000636905 CFAP74Q9C0B2 1584 aa7.85□□□□□ -1.15
SYNGAP1-218ENST00000636905 FAM135AQ9P2D6 1515 aa7.85□□□□□ -1.15
SYNGAP1-218ENST00000636905 CENPBP07199 599 aaPredicted RBP7.85□□□□□ -1.15
SYNGAP1-218ENST00000636905 FOXD1Q16676 465 aa7.85□□□□□ -1.15
SYNGAP1-218ENST00000636905 FANCAO15360 1455 aa7.84□□□□□ -1.15
SYNGAP1-218ENST00000636905 TRAPPC8Q9Y2L5 1435 aa7.84□□□□□ -1.15
SYNGAP1-218ENST00000636905 POLR1AO95602 1720 aaPredicted RBP7.83□□□□□ -1.16
SYNGAP1-218ENST00000636905 MAGI2Q86UL8 1455 aa7.83□□□□□ -1.16
SYNGAP1-218ENST00000636905 SPAG9O60271 1321 aaKnown RBP7.82□□□□□ -1.16
SYNGAP1-218ENST00000636905 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.161e-7■■■■■ 32.2
SYNGAP1-218ENST00000636905 INO80Q9ULG1 1556 aaPredicted RBP7.82□□□□□ -1.16
SYNGAP1-218ENST00000636905 ZFYVE16Q7Z3T8 1539 aa7.82□□□□□ -1.16
SYNGAP1-218ENST00000636905 EIF2AK4Q9P2K8 1649 aaKnown RBP7.81□□□□□ -1.16
SYNGAP1-218ENST00000636905 ATP7AQ04656 1500 aa7.81□□□□□ -1.16
SYNGAP1-218ENST00000636905 DEPDC5O75140 1603 aa7.81□□□□□ -1.16
SYNGAP1-218ENST00000636905 ATP10AO60312 1499 aa7.81□□□□□ -1.16
SYNGAP1-218ENST00000636905 ADGRL1O94910 1474 aa7.81□□□□□ -1.16
SYNGAP1-218ENST00000636905 UHRF1BP1Q6BDS2 1440 aa7.8□□□□□ -1.16
SYNGAP1-218ENST00000636905 SCAPERQ9BY12 1400 aa7.8□□□□□ -1.16
SYNGAP1-218ENST00000636905 DDX10Q13206 875 aaKnown RBP7.8□□□□□ -1.16
SYNGAP1-218ENST00000636905 NBPF8Q3BBV2 869 aa7.8□□□□□ -1.16
SYNGAP1-218ENST00000636905 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
SYNGAP1-218ENST00000636905 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
SYNGAP1-218ENST00000636905 AFAP1Q8N556 730 aa7.79□□□□□ -1.16
SYNGAP1-218ENST00000636905 KIDINS220Q9ULH0 1771 aa7.79□□□□□ -1.16
SYNGAP1-218ENST00000636905 ZNF518AQ6AHZ1 1483 aa7.78□□□□□ -1.16
SYNGAP1-218ENST00000636905 TET3O43151 1660 aa7.78□□□□□ -1.16
SYNGAP1-218ENST00000636905 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms