RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 WDR7Q9Y4E6 1490 aa6.18□□□□□ -1.42
CHD2-225ENST00000636861 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
CHD2-225ENST00000636861 ACIN1Q9UKV3 1341 aaKnown RBP6.18□□□□□ -1.42
CHD2-225ENST00000636861 PTPRGP23470 1445 aa6.17□□□□□ -1.42
CHD2-225ENST00000636861 NCKAP5LQ9HCH0 1330 aa6.17□□□□□ -1.42
CHD2-225ENST00000636861 CCDC88BA6NC98 1476 aa6.16□□□□□ -1.42
CHD2-225ENST00000636861 PPARGC1BQ86YN6 1023 aaKnown RBP6.16□□□□□ -1.42
CHD2-225ENST00000636861 MLECQ14165 292 aa6.15□□□□□ -1.42
CHD2-225ENST00000636861 FANCAO15360 1455 aa6.15□□□□□ -1.43
CHD2-225ENST00000636861 C3P01024 1663 aa6.14□□□□□ -1.43
CHD2-225ENST00000636861 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
CHD2-225ENST00000636861 CLSPNQ9HAW4 1339 aa6.14□□□□□ -1.43
CHD2-225ENST00000636861 RICTORQ6R327 1708 aa6.13□□□□□ -1.43
CHD2-225ENST00000636861 PTPRKQ15262 1439 aa6.13□□□□□ -1.43
CHD2-225ENST00000636861 CPS1P31327 1500 aa6.12□□□□□ -1.43
CHD2-225ENST00000636861 TRIM26Q12899 539 aaPredicted RBP6.12□□□□□ -1.43
CHD2-225ENST00000636861 POGZQ7Z3K3 1410 aa6.12□□□□□ -1.43
CHD2-225ENST00000636861 NHSL1Q5SYE7 1610 aa6.11□□□□□ -1.43
CHD2-225ENST00000636861 UACAQ9BZF9 1416 aa6.11□□□□□ -1.43
CHD2-225ENST00000636861 C1QTNF8P60827 252 aa6.11□□□□□ -1.43
CHD2-225ENST00000636861 STRCP1A6NGW2 1772 aa6.11□□□□□ -1.43
CHD2-225ENST00000636861 TCOF1Q13428 1488 aaKnown RBP6.1□□□□□ -1.43
CHD2-225ENST00000636861 CDK12Q9NYV4 1490 aaPredicted RBP6.1□□□□□ -1.43
CHD2-225ENST00000636861 PRKCSHP14314 528 aaPredicted RBP6.1□□□□□ -1.43
CHD2-225ENST00000636861 APLP2Q06481 763 aa6.1□□□□□ -1.43
CHD2-225ENST00000636861 RGS12O14924 1447 aa6.09□□□□□ -1.43
CHD2-225ENST00000636861 PCNTO95613 3336 aa6.09□□□□□ -1.43
CHD2-225ENST00000636861 CAPN15O75808 1086 aa6.09□□□□□ -1.43
CHD2-225ENST00000636861 LRP6O75581 1613 aa6.09□□□□□ -1.43
CHD2-225ENST00000636861 SHANK2Q9UPX8 1470 aa6.09□□□□□ -1.44
CHD2-225ENST00000636861 RNF17Q9BXT8 1623 aaKnown RBP6.08□□□□□ -1.44
CHD2-225ENST00000636861 VWDEQ8N2E2 1590 aa6.08□□□□□ -1.44
CHD2-225ENST00000636861 TNIKQ9UKE5 1360 aa6.07□□□□□ -1.44
CHD2-225ENST00000636861 ZNF784Q8NCA9 323 aaPredicted RBP6.07□□□□□ -1.44
CHD2-225ENST00000636861 ERICH3Q5RHP9 1530 aa6.07□□□□□ -1.44
CHD2-225ENST00000636861 SUPT6HQ7KZ85 1726 aaKnown RBP6.06□□□□□ -1.44
CHD2-225ENST00000636861 KCNH8Q96L42 1107 aa6.06□□□□□ -1.44
CHD2-225ENST00000636861 GTF3C3Q9Y5Q9 886 aa6.06□□□□□ -1.44
CHD2-225ENST00000636861 AKNAQ7Z591 1439 aa6.06□□□□□ -1.44
CHD2-225ENST00000636861 NEURL4Q96JN8 1562 aa6.06□□□□□ -1.44
CHD2-225ENST00000636861 ZMYM4Q5VZL5 1548 aa6.05□□□□□ -1.44
CHD2-225ENST00000636861 ZNF142P52746 1687 aaPredicted RBP6.05□□□□□ -1.44
CHD2-225ENST00000636861 PLA2R1Q13018 1463 aa6.05□□□□□ -1.44
CHD2-225ENST00000636861 BCL9LQ86UU0 1499 aa6.05□□□□□ -1.44
CHD2-225ENST00000636861 RAPGEF2Q9Y4G8 1499 aa6.05□□□□□ -1.44
CHD2-225ENST00000636861 ZFYVE16Q7Z3T8 1539 aa6.04□□□□□ -1.44
CHD2-225ENST00000636861 XIRP1Q702N8 1843 aaKnown RBP6.04□□□□□ -1.44
CHD2-225ENST00000636861 ANP32EQ9BTT0 268 aa6.04□□□□□ -1.44
CHD2-225ENST00000636861 PPP6R1Q9UPN7 881 aa6.04□□□□□ -1.44
CHD2-225ENST00000636861 TRAPPC8Q9Y2L5 1435 aa6.03□□□□□ -1.44
CHD2-225ENST00000636861 RXRBP28702 533 aa6.03□□□□□ -1.44
CHD2-225ENST00000636861 PHLDB1Q86UU1 1377 aa6.03□□□□□ -1.44
CHD2-225ENST00000636861 ABCA9Q8IUA7 1624 aa6.03□□□□□ -1.44
CHD2-225ENST00000636861 NEO1Q92859 1461 aa6.02□□□□□ -1.44
CHD2-225ENST00000636861 CAMTA1Q9Y6Y1 1673 aa6.02□□□□□ -1.45
CHD2-225ENST00000636861 FHOD3Q2V2M9 1422 aa6.01□□□□□ -1.45
CHD2-225ENST00000636861 POLR1AO95602 1720 aaPredicted RBP6.01□□□□□ -1.45
CHD2-225ENST00000636861 EFCAB5A4FU69 1503 aa6□□□□□ -1.45
CHD2-225ENST00000636861 PRELPP51888 382 aa6□□□□□ -1.45
CHD2-225ENST00000636861 NEUROD1Q13562 356 aa6□□□□□ -1.45
CHD2-225ENST00000636861 PKD2Q13563 968 aa6□□□□□ -1.45
CHD2-225ENST00000636861 MYT1LQ9UL68 1186 aa6□□□□□ -1.45
CHD2-225ENST00000636861 ROBO1Q9Y6N7 1651 aa6□□□□□ -1.45
CHD2-225ENST00000636861 DISP1Q96F81 1524 aa5.99□□□□□ -1.45
CHD2-225ENST00000636861 MYO3AQ8NEV4 1616 aa5.99□□□□□ -1.45
CHD2-225ENST00000636861 ABCA8O94911 1581 aa5.99□□□□□ -1.45
CHD2-225ENST00000636861 ZNF772Q68DY9 489 aaPredicted RBP5.99□□□□□ -1.45
CHD2-225ENST00000636861 HECW1Q76N89 1606 aa5.99□□□□□ -1.45
CHD2-225ENST00000636861 NUTM2BA6NNL0 878 aaPredicted RBP5.98□□□□□ -1.45
CHD2-225ENST00000636861 NUTM2EB1AL46 878 aaPredicted RBP5.98□□□□□ -1.45
CHD2-225ENST00000636861 NUTM2DQ5VT03 806 aaPredicted RBP5.98□□□□□ -1.45
CHD2-225ENST00000636861 NUTM2AQ8IVF1 878 aaPredicted RBP5.98□□□□□ -1.45
CHD2-225ENST00000636861 GOLGB1Q14789 3259 aaKnown RBP5.98□□□□□ -1.45
CHD2-225ENST00000636861 FAM135BQ49AJ0 1406 aa5.98□□□□□ -1.45
CHD2-225ENST00000636861 CEP170BQ9Y4F5 1589 aaPredicted RBP5.97□□□□□ -1.45
CHD2-225ENST00000636861 DENND4BO75064 1496 aaPredicted RBP5.97□□□□□ -1.45
CHD2-225ENST00000636861 ATAD2Q6PL18 1390 aa5.97□□□□□ -1.45
CHD2-225ENST00000636861 PSDA5PKW4 1024 aaPredicted RBP5.97□□□□□ -1.45
CHD2-225ENST00000636861 COL13A1Q5TAT6 717 aaPredicted RBP5.97□□□□□ -1.45
CHD2-225ENST00000636861 FAM9AQ8IZU1 332 aaPredicted RBP5.97□□□□□ -1.45
CHD2-225ENST00000636861 SYNMO15061 1565 aa5.97□□□□□ -1.45
CHD2-225ENST00000636861 CHD4Q14839 1912 aa5.96□□□□□ -1.46
CHD2-225ENST00000636861 FOXD1Q16676 465 aa5.96□□□□□ -1.46
CHD2-225ENST00000636861 PHLPP1O60346 1717 aa5.96□□□□□ -1.46
CHD2-225ENST00000636861 CDK13Q14004 1512 aaKnown RBP5.95□□□□□ -1.46
CHD2-225ENST00000636861 COL16A1Q07092 1604 aaPredicted RBP5.95□□□□□ -1.46
CHD2-225ENST00000636861 C9orf84Q5VXU9 1444 aa5.94□□□□□ -1.46
CHD2-225ENST00000636861 CARMIL2Q6F5E8 1435 aa5.94□□□□□ -1.46
CHD2-225ENST00000636861 CHIC1Q5VXU3 224 aa5.94□□□□□ -1.46
CHD2-225ENST00000636861 ATP10AO60312 1499 aa5.93□□□□□ -1.46
CHD2-225ENST00000636861 ADGBQ8N7X0 1667 aa5.93□□□□□ -1.46
CHD2-225ENST00000636861 KDM5CP41229 1560 aa5.93□□□□□ -1.46
CHD2-225ENST00000636861 NWD1Q149M9 1564 aa5.93□□□□□ -1.46
CHD2-225ENST00000636861 JCADQ9P266 1359 aa5.93□□□□□ -1.46
CHD2-225ENST00000636861 MAGI2Q86UL8 1455 aa5.92□□□□□ -1.46
CHD2-225ENST00000636861 SLC24A1O60721 1099 aa5.92□□□□□ -1.46
CHD2-225ENST00000636861 DEFB132Q7Z7B7 95 aa5.92□□□□□ -1.46
CHD2-225ENST00000636861 DNMT1P26358 1616 aaKnown RBP5.92□□□□□ -1.46
CHD2-225ENST00000636861 NPATQ14207 1427 aa5.91□□□□□ -1.46
CHD2-225ENST00000636861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms