RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	KDM6B	O15054	1643 aa		13.8	□□□□□ -0.2
LGI1-223	ENST00000636775	UACA	Q9BZF9	1416 aa		13.79	□□□□□ -0.2
LGI1-223	ENST00000636775	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.79	□□□□□ -0.2
LGI1-223	ENST00000636775	CDC42BPB	Q9Y5S2	1711 aa		13.79	□□□□□ -0.2
LGI1-223	ENST00000636775	ABCC2	Q92887	1545 aa		13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	UHRF1BP1L	A0JNW5	1464 aa		13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	CAMSAP2	Q08AD1	1489 aa		13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	ABCC10	Q5T3U5	1492 aa		13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	NPM1	P06748	294 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	AKNA	Q7Z591	1439 aa		13.78	□□□□□ -0.2
LGI1-223	ENST00000636775	DAPK1	P53355	1430 aa		13.77	□□□□□ -0.2
LGI1-223	ENST00000636775	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.77	□□□□□ -0.21
LGI1-223	ENST00000636775	DIP2B	Q9P265	1576 aa		13.76	□□□□□ -0.21
LGI1-223	ENST00000636775	PREX2	Q70Z35	1606 aa		13.76	□□□□□ -0.21
LGI1-223	ENST00000636775	ABCC5	O15440	1437 aa		13.74	□□□□□ -0.21
LGI1-223	ENST00000636775	ZNF644	Q9H582	1327 aa	Predicted RBP	13.74	□□□□□ -0.21
LGI1-223	ENST00000636775	PLEKHD1	A6NEE1	506 aa		13.74	□□□□□ -0.21
LGI1-223	ENST00000636775	MYO5C	Q9NQX4	1742 aa		13.73	□□□□□ -0.21
LGI1-223	ENST00000636775	CHIC2	Q9UKJ5	165 aa		13.73	□□□□□ -0.21
LGI1-223	ENST00000636775	TTC37	Q6PGP7	1564 aa		13.72	□□□□□ -0.21
LGI1-223	ENST00000636775	KDM5B	Q9UGL1	1544 aa		13.72	□□□□□ -0.21
LGI1-223	ENST00000636775	RRP7BP	Q9NSQ0	103 aa		13.71	□□□□□ -0.21
LGI1-223	ENST00000636775	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.7	□□□□□ -0.22
LGI1-223	ENST00000636775	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.7	□□□□□ -0.22
LGI1-223	ENST00000636775	ROCK1	Q13464	1354 aa		13.7	□□□□□ -0.22
LGI1-223	ENST00000636775	SAMD9L	Q8IVG5	1584 aa		13.69	□□□□□ -0.22
LGI1-223	ENST00000636775	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
LGI1-223	ENST00000636775	FAM69C	Q0P6D2	419 aa		13.68	□□□□□ -0.22
LGI1-223	ENST00000636775	ASXL2	Q76L83	1435 aa		13.68	□□□□□ -0.22
LGI1-223	ENST00000636775	ADGRL2	O95490	1459 aa		13.67	□□□□□ -0.22
LGI1-223	ENST00000636775	ARHGEF5	Q12774	1597 aa		13.66	□□□□□ -0.22
LGI1-223	ENST00000636775	DENND4B	O75064	1496 aa	Predicted RBP	13.66	□□□□□ -0.22
LGI1-223	ENST00000636775	SIN3A	Q96ST3	1273 aa		13.66	□□□□□ -0.22
LGI1-223	ENST00000636775	GLI2	P10070	1586 aa		13.66	□□□□□ -0.22
LGI1-223	ENST00000636775	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.65	□□□□□ -0.22
LGI1-223	ENST00000636775	TSPOAP1	O95153	1857 aa		13.65	□□□□□ -0.22
LGI1-223	ENST00000636775	SHANK2	Q9UPX8	1470 aa		13.63	□□□□□ -0.23
LGI1-223	ENST00000636775	DIEXF	Q68CQ4	756 aa	Known RBP	13.63	□□□□□ -0.23
LGI1-223	ENST00000636775	NCOA1	Q15788	1441 aa		13.62	□□□□□ -0.23
LGI1-223	ENST00000636775	NEUROD1	Q13562	356 aa		13.62	□□□□□ -0.23
LGI1-223	ENST00000636775	PPRC1	Q5VV67	1664 aa	Known RBP	13.61	□□□□□ -0.23
LGI1-223	ENST00000636775	ARHGAP5	Q13017	1502 aa		13.61	□□□□□ -0.23
LGI1-223	ENST00000636775	MAP3K4	Q9Y6R4	1608 aa		13.61	□□□□□ -0.23
LGI1-223	ENST00000636775	MBD5	Q9P267	1494 aa		13.6	□□□□□ -0.23
LGI1-223	ENST00000636775	WDR7	Q9Y4E6	1490 aa		13.6	□□□□□ -0.23
LGI1-223	ENST00000636775	SYCP2	Q9BX26	1530 aa		13.59	□□□□□ -0.23
LGI1-223	ENST00000636775	C9orf84	Q5VXU9	1444 aa		13.59	□□□□□ -0.23
LGI1-223	ENST00000636775	TRIM52	Q96A61	297 aa		13.58	□□□□□ -0.24
LGI1-223	ENST00000636775	MAST1	Q9Y2H9	1570 aa		13.58	□□□□□ -0.24
LGI1-223	ENST00000636775	CCDC141	Q6ZP82	1450 aa		13.57	□□□□□ -0.24
LGI1-223	ENST00000636775	TIMELESS	Q9UNS1	1208 aa		13.57	□□□□□ -0.24
LGI1-223	ENST00000636775	ANKRD30A	Q9BXX3	1397 aa		13.57	□□□□□ -0.24
LGI1-223	ENST00000636775	PZP	P20742	1482 aa		13.55	□□□□□ -0.24
LGI1-223	ENST00000636775	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
LGI1-223	ENST00000636775	MPHOSPH9	Q99550	1183 aa		13.55	□□□□□ -0.24
LGI1-223	ENST00000636775	ACIN1	Q9UKV3	1341 aa	Known RBP	13.54	□□□□□ -0.24
LGI1-223	ENST00000636775	ABCA9	Q8IUA7	1624 aa		13.54	□□□□□ -0.24
LGI1-223	ENST00000636775	KCNH8	Q96L42	1107 aa		13.54	□□□□□ -0.24
LGI1-223	ENST00000636775	ABCC1	P33527	1531 aa		13.53	□□□□□ -0.24
LGI1-223	ENST00000636775	PLXNC1	O60486	1568 aa		13.53	□□□□□ -0.24
LGI1-223	ENST00000636775	TONSL	Q96HA7	1378 aa		13.53	□□□□□ -0.24
LGI1-223	ENST00000636775	PLCH2	O75038	1416 aa		13.52	□□□□□ -0.24
LGI1-223	ENST00000636775	ANKRD50	Q9ULJ7	1429 aa		13.52	□□□□□ -0.24
LGI1-223	ENST00000636775	PLEKHH2	Q8IVE3	1493 aa		13.52	□□□□□ -0.25
LGI1-223	ENST00000636775	TEX14	Q8IWB6	1497 aa		13.52	□□□□□ -0.25
LGI1-223	ENST00000636775	ARAP3	Q8WWN8	1544 aa		13.52	□□□□□ -0.25
LGI1-223	ENST00000636775	PPP1R15A	O75807	674 aa	Predicted RBP	13.51	□□□□□ -0.25
LGI1-223	ENST00000636775	KDM5D	Q9BY66	1539 aa		13.51	□□□□□ -0.25
LGI1-223	ENST00000636775	ARHGEF12	Q9NZN5	1544 aa		13.51	□□□□□ -0.25
LGI1-223	ENST00000636775	KIAA1107	Q9UPP5	1409 aa		13.5	□□□□□ -0.25
LGI1-223	ENST00000636775	TSPY4	P0CV99	314 aa		13.49	□□□□□ -0.25
LGI1-223	ENST00000636775	TSPY10	P0CW01	314 aa		13.49	□□□□□ -0.25
LGI1-223	ENST00000636775	FOXD1	Q16676	465 aa		13.49	□□□□□ -0.25
LGI1-223	ENST00000636775	KIF15	Q9NS87	1388 aa		13.49	□□□□□ -0.25
LGI1-223	ENST00000636775	ANKRD30B	Q9BXX2	1392 aa		13.48	□□□□□ -0.25
LGI1-223	ENST00000636775	UNC13B	O14795	1591 aa		13.48	□□□□□ -0.25
LGI1-223	ENST00000636775	RSPH4A	Q5TD94	716 aa		13.48	□□□□□ -0.25
LGI1-223	ENST00000636775	CD109	Q6YHK3	1445 aa		13.47	□□□□□ -0.25
LGI1-223	ENST00000636775	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.47	□□□□□ -0.25
LGI1-223	ENST00000636775	RPRD2	Q5VT52	1461 aa	Known RBP	13.46	□□□□□ -0.25
LGI1-223	ENST00000636775	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.44	□□□□□ -0.26
LGI1-223	ENST00000636775	EFCAB2	Q5VUJ9	269 aa		13.43	□□□□□ -0.26
LGI1-223	ENST00000636775	IQGAP3	Q86VI3	1631 aa		13.43	□□□□□ -0.26
LGI1-223	ENST00000636775	TRAPPC8	Q9Y2L5	1435 aa		13.43	□□□□□ -0.26
LGI1-223	ENST00000636775	DUOX2	Q9NRD8	1548 aa		13.42	□□□□□ -0.26
LGI1-223	ENST00000636775	INO80	Q9ULG1	1556 aa	Predicted RBP	13.42	□□□□□ -0.26
LGI1-223	ENST00000636775	ZFYVE16	Q7Z3T8	1539 aa		13.41	□□□□□ -0.26
LGI1-223	ENST00000636775	FAM135A	Q9P2D6	1515 aa		13.41	□□□□□ -0.26
LGI1-223	ENST00000636775	FANCA	O15360	1455 aa		13.41	□□□□□ -0.26
LGI1-223	ENST00000636775	NUP155	O75694	1391 aa		13.41	□□□□□ -0.26
LGI1-223	ENST00000636775	MIER1	Q8N108	512 aa		13.4	□□□□□ -0.26
LGI1-223	ENST00000636775	SCAF1	Q9H7N4	1312 aa	Known RBP	13.4	□□□□□ -0.26
LGI1-223	ENST00000636775	CFAP74	Q9C0B2	1584 aa		13.39	□□□□□ -0.27
LGI1-223	ENST00000636775	PKD2	Q13563	968 aa		13.39	□□□□□ -0.27
LGI1-223	ENST00000636775	MAGI2	Q86UL8	1455 aa		13.38	□□□□□ -0.27
LGI1-223	ENST00000636775	L3MBTL2	Q969R5	705 aa		13.38	□□□□□ -0.27
LGI1-223	ENST00000636775	ERBIN	Q96RT1	1412 aa		13.38	□□□□□ -0.27
LGI1-223	ENST00000636775	POLR1A	O95602	1720 aa	Predicted RBP	13.37	□□□□□ -0.27
LGI1-223	ENST00000636775	ATP7A	Q04656	1500 aa		13.37	□□□□□ -0.27
LGI1-223	ENST00000636775	DEPDC5	O75140	1603 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms